Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC010240.3-201ENST00000607688 395 ntBASIC27.17■■□□□ 1.94
CLTCL1P53675 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC27.17■■□□□ 1.94
CLTCL1P53675 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CLTCL1P53675 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CLTCL1P53675 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CLTCL1P53675 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CLTCL1P53675 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
CLTCL1P53675 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC27.17■■□□□ 1.94
CLTCL1P53675 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CLTCL1P53675 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CLTCL1P53675 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC27.16■■□□□ 1.94
CLTCL1P53675 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CLTCL1P53675 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CLTCL1P53675 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
CLTCL1P53675 IRF5-214ENST00000613821 595 ntTSL 5 BASIC27.16■■□□□ 1.94
CLTCL1P53675 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC27.16■■□□□ 1.94
CLTCL1P53675 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC27.16■■□□□ 1.94
CLTCL1P53675 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
CLTCL1P53675 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CLTCL1P53675 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC27.16■■□□□ 1.94
CLTCL1P53675 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC27.16■■□□□ 1.94
CLTCL1P53675 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CLTCL1P53675 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC27.16■■□□□ 1.94
CLTCL1P53675 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC27.16■■□□□ 1.94
CLTCL1P53675 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CLTCL1P53675 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC27.16■■□□□ 1.94
CLTCL1P53675 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC27.16■■□□□ 1.94
CLTCL1P53675 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
CLTCL1P53675 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CLTCL1P53675 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC27.16■■□□□ 1.94
CLTCL1P53675 CHCHD2P8-201ENST00000429873 447 ntBASIC27.16■■□□□ 1.94
CLTCL1P53675 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC27.16■■□□□ 1.94
CLTCL1P53675 TSSC2-201ENST00000450217 709 ntBASIC27.16■■□□□ 1.94
CLTCL1P53675 PP7080-204ENST00000510714 601 ntTSL 3 BASIC27.16■■□□□ 1.94
CLTCL1P53675 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC27.16■■□□□ 1.94
CLTCL1P53675 AL121672.3-201ENST00000608644 468 ntBASIC27.16■■□□□ 1.94
CLTCL1P53675 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC27.16■■□□□ 1.94
CLTCL1P53675 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
CLTCL1P53675 USP48-205ENST00000421625 2818 ntTSL 2 BASIC27.15■■□□□ 1.94
CLTCL1P53675 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CLTCL1P53675 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CLTCL1P53675 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
CLTCL1P53675 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CLTCL1P53675 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CLTCL1P53675 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CLTCL1P53675 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CLTCL1P53675 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CLTCL1P53675 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC27.15■■□□□ 1.94
CLTCL1P53675 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC27.15■■□□□ 1.94
CLTCL1P53675 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC27.15■■□□□ 1.94
CLTCL1P53675 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CLTCL1P53675 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC27.15■■□□□ 1.94
CLTCL1P53675 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC27.15■■□□□ 1.94
CLTCL1P53675 BX276092.5-203ENST00000456199 560 ntBASIC27.15■■□□□ 1.94
CLTCL1P53675 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC27.15■■□□□ 1.94
CLTCL1P53675 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC27.15■■□□□ 1.94
CLTCL1P53675 TK1-205ENST00000590862 642 ntTSL 3 BASIC27.15■■□□□ 1.94
CLTCL1P53675 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC27.15■■□□□ 1.94
CLTCL1P53675 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC27.15■■□□□ 1.94
CLTCL1P53675 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC27.15■■□□□ 1.94
CLTCL1P53675 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC27.15■■□□□ 1.94
CLTCL1P53675 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
CLTCL1P53675 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC27.15■■□□□ 1.94
CLTCL1P53675 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
CLTCL1P53675 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CLTCL1P53675 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
CLTCL1P53675 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CLTCL1P53675 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
CLTCL1P53675 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CLTCL1P53675 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CLTCL1P53675 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC27.14■■□□□ 1.94
CLTCL1P53675 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC27.14■■□□□ 1.94
CLTCL1P53675 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC27.14■■□□□ 1.94
CLTCL1P53675 AC104390.1-201ENST00000555663 520 ntBASIC27.14■■□□□ 1.94
CLTCL1P53675 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC27.14■■□□□ 1.94
CLTCL1P53675 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC27.14■■□□□ 1.94
CLTCL1P53675 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC27.14■■□□□ 1.93
CLTCL1P53675 POLI-202ENST00000406285 2030 ntTSL 2 BASIC27.14■■□□□ 1.93
CLTCL1P53675 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CLTCL1P53675 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC27.13■■□□□ 1.93
CLTCL1P53675 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC27.13■■□□□ 1.93
CLTCL1P53675 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CLTCL1P53675 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CLTCL1P53675 KRT18P23-201ENST00000435622 1283 ntBASIC27.13■■□□□ 1.93
CLTCL1P53675 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CLTCL1P53675 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC27.13■■□□□ 1.93
CLTCL1P53675 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC27.13■■□□□ 1.93
CLTCL1P53675 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
CLTCL1P53675 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC27.13■■□□□ 1.93
CLTCL1P53675 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC27.13■■□□□ 1.93
CLTCL1P53675 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC27.13■■□□□ 1.93
CLTCL1P53675 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
CLTCL1P53675 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CLTCL1P53675 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CLTCL1P53675 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CLTCL1P53675 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CLTCL1P53675 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CLTCL1P53675 GRAMD4P1-201ENST00000435181 1110 ntBASIC27.12■■□□□ 1.93
CLTCL1P53675 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC27.12■■□□□ 1.93
CLTCL1P53675 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC27.12■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms