Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 DUX4L26-201ENST00000489078 1255 ntBASIC19.47■□□□□ 0.71
SLC6A4P31645 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC6A4P31645 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.47■□□□□ 0.71
SLC6A4P31645 AC139887.4-201ENST00000607877 719 ntBASIC19.47■□□□□ 0.71
SLC6A4P31645 CR769767.2-201ENST00000622735 460 ntBASIC19.47■□□□□ 0.71
SLC6A4P31645 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A4P31645 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC6A4P31645 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SLC6A4P31645 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SLC6A4P31645 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A4P31645 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
SLC6A4P31645 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A4P31645 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A4P31645 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SLC6A4P31645 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC6A4P31645 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A4P31645 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SLC6A4P31645 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC6A4P31645 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SLC6A4P31645 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SLC6A4P31645 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC6A4P31645 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SLC6A4P31645 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 AL049597.2-201ENST00000565575 961 ntBASIC19.46■□□□□ 0.71
SLC6A4P31645 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC6A4P31645 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SLC6A4P31645 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC6A4P31645 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
SLC6A4P31645 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A4P31645 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A4P31645 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A4P31645 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC6A4P31645 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A4P31645 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC6A4P31645 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A4P31645 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A4P31645 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A4P31645 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC6A4P31645 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A4P31645 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A4P31645 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC6A4P31645 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A4P31645 AL161938.1-201ENST00000569833 2180 ntBASIC19.45■□□□□ 0.7
SLC6A4P31645 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A4P31645 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC6A4P31645 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
SLC6A4P31645 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC6A4P31645 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SLC6A4P31645 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.45■□□□□ 0.7
SLC6A4P31645 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SLC6A4P31645 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SLC6A4P31645 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A4P31645 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A4P31645 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC6A4P31645 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A4P31645 AL049812.1-201ENST00000432563 2267 ntBASIC19.45■□□□□ 0.7
SLC6A4P31645 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC6A4P31645 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A4P31645 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC6A4P31645 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC6A4P31645 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A4P31645 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC6A4P31645 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A4P31645 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A4P31645 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC6A4P31645 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.44■□□□□ 0.7
SLC6A4P31645 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.44■□□□□ 0.7
SLC6A4P31645 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC6A4P31645 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC6A4P31645 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SLC6A4P31645 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A4P31645 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A4P31645 AC009947.2-201ENST00000444014 672 ntBASIC19.44■□□□□ 0.7
SLC6A4P31645 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A4P31645 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.44■□□□□ 0.7
SLC6A4P31645 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A4P31645 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A4P31645 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A4P31645 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A4P31645 AL512353.2-201ENST00000448759 1962 ntBASIC19.44■□□□□ 0.7
SLC6A4P31645 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms