Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 GAS2L1P1-201ENST00000420145 1480 ntBASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CSB-PGBD3P0DP91 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 TPSP2-201ENST00000561760 610 ntBASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 AC091304.2-201ENST00000564639 760 ntBASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 RNF126P1-202ENST00000569893 925 ntBASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 AL031008.1-201ENST00000619963 541 ntBASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CSB-PGBD3P0DP91 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CSB-PGBD3P0DP91 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CSB-PGBD3P0DP91 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC25.11■■□□□ 1.61
CSB-PGBD3P0DP91 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CSB-PGBD3P0DP91 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC25.11■■□□□ 1.61
CSB-PGBD3P0DP91 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CSB-PGBD3P0DP91 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CSB-PGBD3P0DP91 AL121772.3-201ENST00000610840 674 ntBASIC25.11■■□□□ 1.61
CSB-PGBD3P0DP91 AC099778.1-201ENST00000568593 1911 ntBASIC25.11■■□□□ 1.61
CSB-PGBD3P0DP91 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CSB-PGBD3P0DP91 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CSB-PGBD3P0DP91 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CSB-PGBD3P0DP91 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CSB-PGBD3P0DP91 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CSB-PGBD3P0DP91 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CSB-PGBD3P0DP91 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CSB-PGBD3P0DP91 FOSL1P1-201ENST00000511041 816 ntBASIC25.1■■□□□ 1.61
CSB-PGBD3P0DP91 CIB2-208ENST00000560618 804 ntTSL 2 BASIC25.1■■□□□ 1.61
CSB-PGBD3P0DP91 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC25.1■■□□□ 1.61
CSB-PGBD3P0DP91 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CSB-PGBD3P0DP91 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CSB-PGBD3P0DP91 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CSB-PGBD3P0DP91 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CSB-PGBD3P0DP91 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CSB-PGBD3P0DP91 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CSB-PGBD3P0DP91 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CSB-PGBD3P0DP91 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 DRAXINP1-201ENST00000437611 948 ntBASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 TOB2P1-201ENST00000469761 992 ntBASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 LINC01711-201ENST00000598340 967 ntBASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 GXYLT1P4-201ENST00000613576 1192 ntBASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 GABARAPL3-202ENST00000624044 1851 ntBASIC25.09■■□□□ 1.61
CSB-PGBD3P0DP91 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
CSB-PGBD3P0DP91 AC092667.1-201ENST00000434301 2586 ntBASIC25.08■■□□□ 1.61
CSB-PGBD3P0DP91 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
CSB-PGBD3P0DP91 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.61
CSB-PGBD3P0DP91 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CSB-PGBD3P0DP91 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
CSB-PGBD3P0DP91 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC25.08■■□□□ 1.61
CSB-PGBD3P0DP91 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC25.08■■□□□ 1.61
CSB-PGBD3P0DP91 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC25.08■■□□□ 1.61
CSB-PGBD3P0DP91 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC25.08■■□□□ 1.61
CSB-PGBD3P0DP91 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CSB-PGBD3P0DP91 KRT8P3-201ENST00000519669 1449 ntBASIC25.08■■□□□ 1.61
CSB-PGBD3P0DP91 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CSB-PGBD3P0DP91 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.08■■□□□ 1.61
CSB-PGBD3P0DP91 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CSB-PGBD3P0DP91 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
CSB-PGBD3P0DP91 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CSB-PGBD3P0DP91 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC25.07■■□□□ 1.6
CSB-PGBD3P0DP91 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
CSB-PGBD3P0DP91 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC25.07■■□□□ 1.6
CSB-PGBD3P0DP91 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CSB-PGBD3P0DP91 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CSB-PGBD3P0DP91 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CSB-PGBD3P0DP91 AC079781.3-201ENST00000449110 356 ntBASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms