Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC8.47□□□□□ -1.05
USH2AO75445 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC8.47□□□□□ -1.05
USH2AO75445 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
USH2AO75445 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC8.47□□□□□ -1.05
USH2AO75445 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC8.47□□□□□ -1.05
USH2AO75445 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC8.47□□□□□ -1.05
USH2AO75445 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
USH2AO75445 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC8.46□□□□□ -1.05
USH2AO75445 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
USH2AO75445 CREM-210ENST00000374721 2020 ntTSL 5 BASIC8.46□□□□□ -1.05
USH2AO75445 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
USH2AO75445 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
USH2AO75445 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
USH2AO75445 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
USH2AO75445 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC8.46□□□□□ -1.05
USH2AO75445 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
USH2AO75445 METTL26-204ENST00000397665 558 ntTSL 2 BASIC8.46□□□□□ -1.05
USH2AO75445 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC8.46□□□□□ -1.05
USH2AO75445 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC8.46□□□□□ -1.05
USH2AO75445 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
USH2AO75445 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC8.46□□□□□ -1.05
USH2AO75445 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC8.46□□□□□ -1.05
USH2AO75445 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC8.46□□□□□ -1.05
USH2AO75445 PAM16-208ENST00000573553 722 ntTSL 2 BASIC8.46□□□□□ -1.05
USH2AO75445 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC8.46□□□□□ -1.05
USH2AO75445 AF106564.1-201ENST00000607058 2553 ntBASIC8.46□□□□□ -1.05
USH2AO75445 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
USH2AO75445 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC8.46□□□□□ -1.05
USH2AO75445 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
USH2AO75445 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC8.46□□□□□ -1.06
USH2AO75445 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC8.46□□□□□ -1.06
USH2AO75445 YBX1P5-201ENST00000509441 847 ntBASIC8.46□□□□□ -1.06
USH2AO75445 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC8.46□□□□□ -1.06
USH2AO75445 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC8.46□□□□□ -1.06
USH2AO75445 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
USH2AO75445 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
USH2AO75445 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC8.46□□□□□ -1.06
USH2AO75445 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC8.46□□□□□ -1.06
USH2AO75445 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC8.46□□□□□ -1.06
USH2AO75445 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC8.46□□□□□ -1.06
USH2AO75445 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
USH2AO75445 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
USH2AO75445 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
USH2AO75445 AL355877.3-201ENST00000622820 899 ntBASIC8.46□□□□□ -1.06
USH2AO75445 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
USH2AO75445 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC8.46□□□□□ -1.06
USH2AO75445 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
USH2AO75445 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC8.46□□□□□ -1.06
USH2AO75445 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC8.46□□□□□ -1.06
USH2AO75445 AC079834.2-201ENST00000609776 1949 ntBASIC8.46□□□□□ -1.06
USH2AO75445 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
USH2AO75445 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
USH2AO75445 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
USH2AO75445 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
USH2AO75445 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC8.46□□□□□ -1.06
USH2AO75445 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
USH2AO75445 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
USH2AO75445 GSAP-205ENST00000430584 600 ntTSL 5 BASIC8.46□□□□□ -1.06
USH2AO75445 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC8.46□□□□□ -1.06
USH2AO75445 MINOS1P3-201ENST00000457048 203 ntBASIC8.46□□□□□ -1.06
USH2AO75445 ALG1L5P-201ENST00000482043 771 ntBASIC8.46□□□□□ -1.06
USH2AO75445 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC8.46□□□□□ -1.06
USH2AO75445 COPE-211ENST00000600932 1144 ntTSL 5 BASIC8.46□□□□□ -1.06
USH2AO75445 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC8.45□□□□□ -1.06
USH2AO75445 PHGDH-210ENST00000641115 1638 ntBASIC8.45□□□□□ -1.06
USH2AO75445 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 SYS1-203ENST00000414310 795 ntTSL 3 BASIC8.45□□□□□ -1.06
USH2AO75445 MIR4745-201ENST00000577608 62 ntBASIC8.45□□□□□ -1.06
USH2AO75445 AC138761.1-201ENST00000584393 385 ntBASIC8.45□□□□□ -1.06
USH2AO75445 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC8.45□□□□□ -1.06
USH2AO75445 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
USH2AO75445 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC8.45□□□□□ -1.06
USH2AO75445 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC8.45□□□□□ -1.06
USH2AO75445 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC8.45□□□□□ -1.06
USH2AO75445 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC8.45□□□□□ -1.06
USH2AO75445 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
USH2AO75445 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
USH2AO75445 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC8.45□□□□□ -1.06
USH2AO75445 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC8.45□□□□□ -1.06
USH2AO75445 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
USH2AO75445 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 RPS2P1-201ENST00000434010 821 ntBASIC8.45□□□□□ -1.06
USH2AO75445 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC8.45□□□□□ -1.06
USH2AO75445 IRF8-202ENST00000562492 946 ntTSL 3 BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms