Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSNA1O43805 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.18■□□□□ 0.18
SSNA1O43805 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SSNA1O43805 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.18■□□□□ 0.18
SSNA1O43805 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSNA1O43805 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSNA1O43805 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.17■□□□□ 0.18
SSNA1O43805 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SSNA1O43805 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.17■□□□□ 0.18
SSNA1O43805 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
SSNA1O43805 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.17■□□□□ 0.18
SSNA1O43805 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SSNA1O43805 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.17■□□□□ 0.18
SSNA1O43805 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SSNA1O43805 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.17■□□□□ 0.18
SSNA1O43805 KRT16P3-201ENST00000439127 1283 ntBASIC16.17■□□□□ 0.18
SSNA1O43805 IGHV3-19-201ENST00000521488 291 ntBASIC16.17■□□□□ 0.18
SSNA1O43805 AL356652.1-201ENST00000615962 565 ntBASIC16.17■□□□□ 0.18
SSNA1O43805 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.17■□□□□ 0.18
SSNA1O43805 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
SSNA1O43805 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SSNA1O43805 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSNA1O43805 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SSNA1O43805 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.16■□□□□ 0.18
SSNA1O43805 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SSNA1O43805 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.16■□□□□ 0.18
SSNA1O43805 PTBP1P-201ENST00000554374 1601 ntBASIC16.16■□□□□ 0.18
SSNA1O43805 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.16■□□□□ 0.18
SSNA1O43805 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SSNA1O43805 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.16■□□□□ 0.18
SSNA1O43805 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.16■□□□□ 0.18
SSNA1O43805 AC126544.1-201ENST00000580842 1059 ntBASIC16.16■□□□□ 0.18
SSNA1O43805 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.16■□□□□ 0.18
SSNA1O43805 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SSNA1O43805 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.16■□□□□ 0.18
SSNA1O43805 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 AL162741.1-201ENST00000565563 1558 ntBASIC16.16■□□□□ 0.18
SSNA1O43805 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.16■□□□□ 0.18
SSNA1O43805 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SSNA1O43805 PHGDH-210ENST00000641115 1638 ntBASIC16.16■□□□□ 0.18
SSNA1O43805 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSNA1O43805 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSNA1O43805 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSNA1O43805 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
SSNA1O43805 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSNA1O43805 AC141586.5-201ENST00000624546 2050 ntBASIC16.15■□□□□ 0.18
SSNA1O43805 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSNA1O43805 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSNA1O43805 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSNA1O43805 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.15■□□□□ 0.18
SSNA1O43805 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSNA1O43805 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSNA1O43805 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SSNA1O43805 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SSNA1O43805 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSNA1O43805 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSNA1O43805 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SSNA1O43805 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.15■□□□□ 0.18
SSNA1O43805 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SSNA1O43805 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SSNA1O43805 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSNA1O43805 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.15■□□□□ 0.18
SSNA1O43805 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.15■□□□□ 0.18
SSNA1O43805 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.15■□□□□ 0.18
SSNA1O43805 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.15■□□□□ 0.18
SSNA1O43805 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.15■□□□□ 0.18
SSNA1O43805 AL031963.3-201ENST00000606441 850 ntBASIC16.15■□□□□ 0.18
SSNA1O43805 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSNA1O43805 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms