Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
FOXN1O15353 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC22.66■■□□□ 1.22
FOXN1O15353 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.66■■□□□ 1.22
FOXN1O15353 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.66■■□□□ 1.22
FOXN1O15353 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.66■■□□□ 1.22
FOXN1O15353 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXN1O15353 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.66■■□□□ 1.22
FOXN1O15353 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.65■■□□□ 1.22
FOXN1O15353 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN1O15353 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN1O15353 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN1O15353 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN1O15353 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN1O15353 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
FOXN1O15353 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.65■■□□□ 1.22
FOXN1O15353 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN1O15353 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC22.65■■□□□ 1.22
FOXN1O15353 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN1O15353 LINC01711-201ENST00000598340 967 ntBASIC22.65■■□□□ 1.22
FOXN1O15353 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN1O15353 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC22.65■■□□□ 1.22
FOXN1O15353 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.65■■□□□ 1.22
FOXN1O15353 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN1O15353 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
FOXN1O15353 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN1O15353 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.65■■□□□ 1.22
FOXN1O15353 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN1O15353 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN1O15353 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN1O15353 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN1O15353 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN1O15353 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC22.65■■□□□ 1.22
FOXN1O15353 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXN1O15353 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC22.64■■□□□ 1.22
FOXN1O15353 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
FOXN1O15353 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
FOXN1O15353 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
FOXN1O15353 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
FOXN1O15353 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
FOXN1O15353 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
FOXN1O15353 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.64■■□□□ 1.21
FOXN1O15353 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.64■■□□□ 1.21
FOXN1O15353 HBZP1-201ENST00000354915 429 ntBASIC22.64■■□□□ 1.21
FOXN1O15353 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FOXN1O15353 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.64■■□□□ 1.21
FOXN1O15353 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.64■■□□□ 1.21
FOXN1O15353 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC22.64■■□□□ 1.21
FOXN1O15353 BMF-207ENST00000559701 630 ntTSL 3 BASIC22.64■■□□□ 1.21
FOXN1O15353 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
FOXN1O15353 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC22.64■■□□□ 1.21
FOXN1O15353 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.64■■□□□ 1.21
FOXN1O15353 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FOXN1O15353 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FOXN1O15353 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
FOXN1O15353 AL158211.5-201ENST00000623583 2518 ntBASIC22.64■■□□□ 1.21
FOXN1O15353 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
FOXN1O15353 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
FOXN1O15353 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
FOXN1O15353 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
FOXN1O15353 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXN1O15353 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXN1O15353 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXN1O15353 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.63■■□□□ 1.21
FOXN1O15353 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXN1O15353 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXN1O15353 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
FOXN1O15353 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
FOXN1O15353 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC22.63■■□□□ 1.21
FOXN1O15353 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC22.63■■□□□ 1.21
FOXN1O15353 AP003041.3-201ENST00000527151 707 ntBASIC22.63■■□□□ 1.21
FOXN1O15353 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.63■■□□□ 1.21
FOXN1O15353 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC22.63■■□□□ 1.21
FOXN1O15353 AC011498.5-201ENST00000592027 486 ntBASIC22.63■■□□□ 1.21
FOXN1O15353 AL121912.1-201ENST00000603683 238 ntBASIC22.63■■□□□ 1.21
FOXN1O15353 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.63■■□□□ 1.21
FOXN1O15353 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.63■■□□□ 1.21
FOXN1O15353 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
FOXN1O15353 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
FOXN1O15353 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FOXN1O15353 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FOXN1O15353 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
FOXN1O15353 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN1O15353 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN1O15353 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN1O15353 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN1O15353 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN1O15353 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC22.62■■□□□ 1.21
FOXN1O15353 HLA-G-202ENST00000376815 851 ntBASIC22.62■■□□□ 1.21
FOXN1O15353 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.62■■□□□ 1.21
FOXN1O15353 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN1O15353 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
FOXN1O15353 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
FOXN1O15353 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN1O15353 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC22.62■■□□□ 1.21
FOXN1O15353 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
FOXN1O15353 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.62■■□□□ 1.21
FOXN1O15353 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.62■■□□□ 1.21
FOXN1O15353 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXN1O15353 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
FOXN1O15353 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms