Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA2E9PIF3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 TSPY17P-201ENST00000450329 467 ntBASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 WWOX-216ENST00000569818 525 ntBASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 AC087388.1-201ENST00000571370 1112 ntBASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA2E9PIF3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 AC010653.2-201ENST00000623505 997 ntBASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPA2E9PIF3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPIPA2E9PIF3 AC092338.2-201ENST00000568827 1415 ntBASIC17.27■□□□□ 0.35
NPIPA2E9PIF3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPIPA2E9PIF3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NPIPA2E9PIF3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
NPIPA2E9PIF3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NPIPA2E9PIF3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.27■□□□□ 0.35
NPIPA2E9PIF3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
NPIPA2E9PIF3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NPIPA2E9PIF3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.27■□□□□ 0.35
NPIPA2E9PIF3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
NPIPA2E9PIF3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 CKBP1-201ENST00000565489 1086 ntBASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPA2E9PIF3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms