Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
DNMT3AQ9Y6K1 AL133243.3-201ENST00000617415 3004 ntBASIC4.43□□□□□ -1.7
DNMT3AQ9Y6K1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
DNMT3AQ9Y6K1 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
DNMT3AQ9Y6K1 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 RNU6-1285P-201ENST00000363480 105 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 RNU6-873P-201ENST00000363833 107 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 RNU1-32P-201ENST00000363937 159 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 Y_RNA.229-201ENST00000364347 113 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 RNU6-597P-201ENST00000365620 102 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 SNORA72-201ENST00000384339 132 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 AC245291.1-201ENST00000419501 328 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 AC012306.1-201ENST00000423267 114 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 RPEP3-201ENST00000425462 676 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 RPL39P39-201ENST00000455840 151 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 AL441985.1-201ENST00000457727 251 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 RN7SL585P-201ENST00000470538 280 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 AC107626.1-201ENST00000471084 183 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 RPL39P34-201ENST00000477141 156 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 AC021205.2-201ENST00000480069 347 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 RNA5SP497-201ENST00000516081 97 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 RN7SKP21-201ENST00000516503 220 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 HMGN2P15-201ENST00000585707 270 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 AL356218.2-201ENST00000605264 187 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 AC015813.4-201ENST00000610469 179 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 AL138880.2-201ENST00000616214 239 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 AC091905.2-201ENST00000623143 306 ntBASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DNMT3AQ9Y6K1 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 RNU6-787P-201ENST00000384032 107 ntBASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 Y_RNA.498-201ENST00000384460 102 ntBASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 MIR659-201ENST00000384963 97 ntBASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 MIR590-201ENST00000385008 97 ntBASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 SNORD96B-201ENST00000386148 79 ntBASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 MIR3065-201ENST00000390137 79 ntBASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 AC009963.1-201ENST00000417265 157 ntBASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 AP002884.2-201ENST00000471647 395 ntBASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 RPL30P12-201ENST00000474666 353 ntBASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 RNU6-857P-201ENST00000515893 110 ntBASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 AC007012.1-201ENST00000567192 175 ntBASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 AC105137.2-201ENST00000569073 466 ntBASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 RNU6-91P-201ENST00000607774 107 ntBASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 AC010329.5-201ENST00000623497 2174 ntBASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.41□□□□□ -1.7
DNMT3AQ9Y6K1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.4□□□□□ -1.7
DNMT3AQ9Y6K1 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
DNMT3AQ9Y6K1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
DNMT3AQ9Y6K1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
DNMT3AQ9Y6K1 AC087190.4-201ENST00000574616 8334 ntBASIC4.4□□□□□ -1.7
DNMT3AQ9Y6K1 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
DNMT3AQ9Y6K1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 RNA5SP125-201ENST00000364843 120 ntBASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 RNU6-497P-201ENST00000365316 104 ntBASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 RNU6-1014P-201ENST00000383940 103 ntBASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 RNU6-748P-201ENST00000384648 107 ntBASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 AL591419.1-201ENST00000427423 339 ntBASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 HMGB1P37-201ENST00000439613 609 ntBASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 RN7SL481P-201ENST00000477764 299 ntBASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 RNA5SP309-201ENST00000516670 106 ntBASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 GNRHR2P1-201ENST00000555315 631 ntBASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 MIR4284-201ENST00000578924 81 ntBASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 MIR3136-201ENST00000583498 78 ntBASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 RPL30P11-203ENST00000598995 310 ntBASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 AC008745.1-201ENST00000604064 271 ntBASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 MIR6748-201ENST00000610433 71 ntBASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
DNMT3AQ9Y6K1 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 Y_RNA.17-201ENST00000362433 111 ntBASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 Y_RNA.287-201ENST00000364853 94 ntBASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 SNORA36A-201ENST00000384221 132 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms