Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.15□□□□□ -1.75
HRH3Q9Y5N1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.15□□□□□ -1.75
HRH3Q9Y5N1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.15□□□□□ -1.75
HRH3Q9Y5N1 AC025445.1-201ENST00000502728 300 ntBASIC4.15□□□□□ -1.75
HRH3Q9Y5N1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.15□□□□□ -1.75
HRH3Q9Y5N1 ARF4P1-201ENST00000605447 541 ntBASIC4.15□□□□□ -1.75
HRH3Q9Y5N1 AC069200.1-201ENST00000609511 323 ntBASIC4.15□□□□□ -1.75
HRH3Q9Y5N1 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HRH3Q9Y5N1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.15□□□□□ -1.75
HRH3Q9Y5N1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.15□□□□□ -1.75
HRH3Q9Y5N1 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.15□□□□□ -1.75
HRH3Q9Y5N1 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HRH3Q9Y5N1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.15□□□□□ -1.75
HRH3Q9Y5N1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 RNU6-1298P-201ENST00000362456 101 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 Y_RNA.40-201ENST00000362645 93 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 RNU6-1255P-201ENST00000363434 112 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 Y_RNA.251-201ENST00000364551 99 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 RNU6-597P-201ENST00000365620 102 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 AL591034.1-201ENST00000407447 340 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 AIMP1P2-201ENST00000425294 312 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 RNU1-61P-201ENST00000516107 151 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 RNU7-115P-201ENST00000516433 55 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 Y_RNA.692-201ENST00000516627 105 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 TOMM20P2-201ENST00000540082 421 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 MIR378D2-201ENST00000580636 98 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 MIR3939-201ENST00000582614 106 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 AC023043.3-201ENST00000593113 385 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 AL031274.2-201ENST00000599419 203 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 AC068724.3-201ENST00000625906 87 ntBASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HRH3Q9Y5N1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 RNU6-755P-201ENST00000364400 103 ntBASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 SNORA71.2-201ENST00000364941 134 ntBASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 MIR548B-201ENST00000385247 97 ntBASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 Y_RNA.622-201ENST00000411091 108 ntBASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 RNA5SP446-201ENST00000515955 82 ntBASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 RNU2-58P-201ENST00000516403 183 ntBASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 AC069240.1-201ENST00000548774 375 ntBASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 MIR6891-201ENST00000618788 93 ntBASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 MIR7154-201ENST00000620673 73 ntBASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HRH3Q9Y5N1 CPHL1P-201ENST00000461341 3407 ntBASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 RNU6-235P-201ENST00000362644 107 ntBASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 SNORA25.7-201ENST00000364375 127 ntBASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 RNA5SP267-201ENST00000364893 126 ntBASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 SNORA67.2-201ENST00000384300 149 ntBASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 Y_RNA.525-201ENST00000384570 113 ntBASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 AL512604.1-201ENST00000404812 257 ntBASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 RNA5SP39-201ENST00000411245 120 ntBASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 AL356387.2-201ENST00000422272 243 ntBASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 RPL23AP62-201ENST00000463396 453 ntBASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 RPS26P28-201ENST00000470806 348 ntBASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 MIR3613-201ENST00000579844 87 ntBASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 AC099778.2-201ENST00000610904 211 ntBASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 AC114781.5-201ENST00000615297 108 ntBASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 MIR3914-2-201ENST00000637339 95 ntBASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HRH3Q9Y5N1 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 AF117829.1-206ENST00000621883 3802 ntBASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 SNORD45.3-201ENST00000363836 72 ntBASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HRH3Q9Y5N1 MIR586-201ENST00000385035 97 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms