Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 MIR367-201ENST00000362299 68 ntBASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 RNU6-728P-201ENST00000365375 104 ntBASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 RNA5SP22-201ENST00000365393 109 ntBASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 AP002088.1-201ENST00000382740 395 ntBASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 AL139281.1-201ENST00000422120 335 ntBASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 SRIP1-201ENST00000489235 288 ntBASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 YWHAEP4-201ENST00000505390 198 ntBASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 AC106785.1-201ENST00000565935 262 ntBASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 AC012640.5-201ENST00000623897 319 ntBASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 MIR6844-201ENST00000637122 62 ntBASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHB11Q9Y5F2 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 ZNF702P-202ENST00000434269 1966 ntBASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 RNU6-1210P-201ENST00000363775 107 ntBASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 RNU1-44P-201ENST00000384453 163 ntBASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 RNU6-768P-201ENST00000384683 107 ntBASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 MIR3065-201ENST00000390137 79 ntBASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 RN7SKP167-201ENST00000411047 285 ntBASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 HMGN2P16-201ENST00000456802 261 ntBASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 RPL32P34-201ENST00000486380 400 ntBASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 AC091167.1-201ENST00000492017 396 ntBASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 RNU6-561P-201ENST00000516222 102 ntBASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 AP001328.1-201ENST00000528550 176 ntBASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 AL136164.4-201ENST00000625013 2135 ntBASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 MIR3653-201ENST00000625572 110 ntBASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
PCDHB11Q9Y5F2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 RNU6-655P-201ENST00000362858 107 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 RNA5SP307-201ENST00000362863 116 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 RNA5SP366-201ENST00000365454 123 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 Y_RNA.393-201ENST00000383936 102 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 SNORA37-201ENST00000384504 129 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 MIR548B-201ENST00000385247 97 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 MIR147B-201ENST00000390185 80 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 AL591034.1-201ENST00000407447 340 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 RNU2-49P-201ENST00000410666 184 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 AL691449.1-201ENST00000426570 421 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 S100A11P1-201ENST00000477525 312 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 RN7SL812P-201ENST00000493791 279 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 RNU2-58P-201ENST00000516403 183 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 CYCSP29-201ENST00000533731 318 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 RN7SL176P-201ENST00000580352 264 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 U7.2-201ENST00000607576 63 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 MIR6076-201ENST00000617521 113 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 MIR6891-201ENST00000618788 93 ntBASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHB11Q9Y5F2 AC010889.1-201ENST00000566193 2666 ntBASIC4.28□□□□□ -1.73
PCDHB11Q9Y5F2 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 AL359837.1-201ENST00000381357 287 ntBASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 SNORA74C-2-201ENST00000411179 201 ntBASIC4.27□□□□□ -1.73
PCDHB11Q9Y5F2 RPS27P1-201ENST00000450552 247 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms