Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHB4Q9Y5E5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 ADAM3A-203ENST00000461344 2157 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 RNU6-1141P-201ENST00000364520 107 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 Y_RNA.277-201ENST00000364754 102 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 Y_RNA.319-201ENST00000365138 92 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 MIR487A-201ENST00000385009 80 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 SNORD58.1-201ENST00000391313 66 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 SNORA48.8-201ENST00000391324 134 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 AC010401.1-201ENST00000463867 348 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 AC021205.2-201ENST00000480069 347 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 RPS4XP22-201ENST00000480755 780 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 AP001025.1-201ENST00000486139 332 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 SCARNA24.2-201ENST00000516968 130 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 HIGD1AP1-201ENST00000550979 275 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 AC021739.1-201ENST00000559631 174 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 CUL1P1-201ENST00000509510 2425 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 AC007496.3-201ENST00000624987 3443 ntBASIC3.56□□□□□ -1.84
PCDHB4Q9Y5E5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 AC110491.1-201ENST00000562191 2010 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 AL021368.2-201ENST00000606125 5352 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 RNA5SP119-201ENST00000362715 117 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 Y_RNA.65-201ENST00000362846 100 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 RNY1-201ENST00000364228 113 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 SNORA36A-201ENST00000384221 132 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 Y_RNA.462-201ENST00000384268 102 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 Y_RNA.785-201ENST00000384290 109 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 RNU6-541P-201ENST00000384709 110 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 MIR10B-201ENST00000385011 110 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 MIR670-201ENST00000390142 98 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 SNORD12B-201ENST00000410433 91 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 AC005300.1-201ENST00000428401 373 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 AC005002.2-201ENST00000438228 269 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 GPM6BP3-201ENST00000442797 145 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 HSPE1P25-201ENST00000455484 251 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 AC016632.1-201ENST00000503994 196 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 UBL5P4-201ENST00000562584 236 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 MIR4429-201ENST00000580105 73 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 uc_338.1-201ENST00000612113 180 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHB4Q9Y5E5 RNU1-70P-201ENST00000362618 164 ntBASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 RNU6-290P-201ENST00000365212 101 ntBASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 SNORD63-201ENST00000384262 68 ntBASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 SNORA48.7-201ENST00000391302 135 ntBASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 RN7SKP61-201ENST00000410642 295 ntBASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 AL445305.1-201ENST00000432577 575 ntBASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 AC008155.2-201ENST00000464337 397 ntBASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 RNU1-61P-201ENST00000516107 151 ntBASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 RNU4-71P-201ENST00000516258 113 ntBASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 Y_RNA.700-201ENST00000516806 100 ntBASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 CKS1BP7-201ENST00000522230 235 ntBASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 AC006199.1-201ENST00000548728 219 ntBASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 MIR5695-201ENST00000579717 85 ntBASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 BX284668.6-201ENST00000606899 438 ntBASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.54□□□□□ -1.84
PCDHB4Q9Y5E5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 AL079305.1-201ENST00000623159 3008 ntBASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 AL049781.1-201ENST00000623195 3585 ntBASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 RNA5SP295-201ENST00000362655 121 ntBASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 RNU6-280P-201ENST00000364145 104 ntBASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 RNU1-33P-201ENST00000364249 162 ntBASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 Y_RNA.269-201ENST00000364685 89 ntBASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 Y_RNA.274-201ENST00000364714 101 ntBASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 AP000567.1-201ENST00000406413 156 ntBASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 RNU6-1001P-201ENST00000411265 100 ntBASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 AC093578.1-201ENST00000415219 368 ntBASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 PIGPP3-201ENST00000425307 415 ntBASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 WARS2P1-201ENST00000429678 537 ntBASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDHB4Q9Y5E5 HMGN1P18-201ENST00000457642 277 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms