Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 Y_RNA.687-201ENST00000516558 91 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.38□□□□□ -2.19
SHANK1Q9Y566 OR4R1P-201ENST00000529879 463 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC090115.3-201ENST00000553218 849 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC092325.1-201ENST00000566449 554 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 MIR4703-201ENST00000577728 79 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC093788.1-201ENST00000609356 927 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 OR5AK4P-201ENST00000635912 903 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.38□□□□□ -2.19
SHANK1Q9Y566 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 U8.1-201ENST00000362843 134 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RNU6-1085P-201ENST00000363576 107 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RNU6-234P-201ENST00000365229 104 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 SNORD114-22-201ENST00000365423 72 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RNU6-1222P-201ENST00000384615 107 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 MTCO1P21-201ENST00000416634 589 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 HMGN2P10-201ENST00000448085 265 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 TPTE2P5-203ENST00000458118 728 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RNU7-26P-201ENST00000458980 63 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 MTND1P5-201ENST00000517906 940 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RPS15AP11-201ENST00000594193 385 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AC080078.3-201ENST00000605407 463 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AC024581.2-201ENST00000619986 252 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 ZNF209P-201ENST00000593450 2304 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RNU6-37P-201ENST00000362692 107 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RNU6-11P-201ENST00000364234 107 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RNU6-25P-201ENST00000383873 107 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RNU6-48P-201ENST00000384161 107 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RNU6-74P-201ENST00000384235 107 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RNU6-16P-201ENST00000384385 107 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RNU6-15P-201ENST00000384534 107 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RNU6-29P-201ENST00000384637 107 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 MIR10A-201ENST00000385043 110 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 MIR95-201ENST00000385072 81 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 FO393413.1-201ENST00000402892 195 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AL030996.1-201ENST00000411430 235 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 BTF3L4P1-201ENST00000413813 468 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 MTCO1P20-201ENST00000425366 358 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RPL23AP95-201ENST00000426806 265 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AL358934.1-201ENST00000432346 324 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RPS15AP10-201ENST00000432472 382 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AL031667.1-201ENST00000440222 725 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RNU7-63P-201ENST00000459054 62 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AC009646.1-201ENST00000510455 318 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 RNU6-1178P-201ENST00000516674 107 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AP005597.4-201ENST00000526762 229 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 MIR3117-201ENST00000584034 78 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AC104458.1-201ENST00000608243 463 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AC068944.2-201ENST00000610373 403 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 U2.17-201ENST00000611454 95 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 FAM157A-202ENST00000615155 405 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.37□□□□□ -2.19
SHANK1Q9Y566 MIR3529-201ENST00000637713 78 ntBASIC1.37□□□□□ -2.19
SHANK1Q9Y566 AC006026.1-201ENST00000444025 1803 ntBASIC1.36□□□□□ -2.19
SHANK1Q9Y566 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.36□□□□□ -2.19
SHANK1Q9Y566 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SHANK1Q9Y566 RNU6-1010P-201ENST00000362757 107 ntBASIC1.36□□□□□ -2.19
SHANK1Q9Y566 SNORA16.1-201ENST00000364597 132 ntBASIC1.36□□□□□ -2.19
SHANK1Q9Y566 RNU6-1180P-201ENST00000364935 107 ntBASIC1.36□□□□□ -2.19
SHANK1Q9Y566 RNU6-550P-201ENST00000391057 101 ntBASIC1.36□□□□□ -2.19
SHANK1Q9Y566 RNU6-607P-201ENST00000411283 108 ntBASIC1.36□□□□□ -2.19
SHANK1Q9Y566 AC074117.2-201ENST00000417130 397 ntBASIC1.36□□□□□ -2.19
SHANK1Q9Y566 SNRPEP10-201ENST00000420249 274 ntBASIC1.36□□□□□ -2.19
SHANK1Q9Y566 RPS3AP44-201ENST00000425466 790 ntBASIC1.36□□□□□ -2.19
SHANK1Q9Y566 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.36□□□□□ -2.19
SHANK1Q9Y566 UBE2V1P8-201ENST00000437166 265 ntBASIC1.36□□□□□ -2.19
SHANK1Q9Y566 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.36□□□□□ -2.19
SHANK1Q9Y566 MTND1P1-201ENST00000445453 368 ntBASIC1.36□□□□□ -2.19
SHANK1Q9Y566 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.36□□□□□ -2.19
SHANK1Q9Y566 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.36□□□□□ -2.19
SHANK1Q9Y566 COX6CP14-201ENST00000469580 174 ntBASIC1.36□□□□□ -2.19
SHANK1Q9Y566 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.36□□□□□ -2.19
SHANK1Q9Y566 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.36□□□□□ -2.19
SHANK1Q9Y566 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.36□□□□□ -2.19
SHANK1Q9Y566 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.36□□□□□ -2.19
SHANK1Q9Y566 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.36□□□□□ -2.19
SHANK1Q9Y566 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
SHANK1Q9Y566 AL359851.1-201ENST00000569460 4997 ntBASIC1.36□□□□□ -2.19
SHANK1Q9Y566 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.36□□□□□ -2.19
SHANK1Q9Y566 RNY4P14-201ENST00000363656 96 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 SNORA69-201ENST00000383895 132 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms