Protein–RNA interactions for Protein: Q9UMW8

USP18, Ubl carboxyl-terminal hydrolase 18, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP18Q9UMW8 SNORD115-32-201ENST00000364079 82 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 Y_RNA.210-201ENST00000364161 110 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 RNU4-50P-201ENST00000364361 141 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.39□□□□□ -1.87
USP18Q9UMW8 Y_RNA.401-201ENST00000383965 117 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 SNORA29-201ENST00000384183 140 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
USP18Q9UMW8 RNA5SP252-201ENST00000391131 119 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 RNU6-1077P-201ENST00000410506 102 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 RN7SKP61-201ENST00000410642 295 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 RPL21P2-201ENST00000440049 481 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.39□□□□□ -1.87
USP18Q9UMW8 AL731563.1-201ENST00000442202 214 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 FCF1P4-201ENST00000448326 183 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.39□□□□□ -1.87
USP18Q9UMW8 RNU5F-8P-201ENST00000515941 111 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 SNORA64.4-201ENST00000516632 81 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 Y_RNA.706-201ENST00000516933 99 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 AL161670.1-201ENST00000554348 137 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 MIR5571-201ENST00000577998 113 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 AC090897.2-201ENST00000581715 130 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 AC073657.2-201ENST00000605661 303 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 AC006111.3-201ENST00000622137 383 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.39□□□□□ -1.87
USP18Q9UMW8 MIR7153-201ENST00000637758 57 ntBASIC3.39□□□□□ -1.87
USP18Q9UMW8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.39□□□□□ -1.87
USP18Q9UMW8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
USP18Q9UMW8 RBBP8P1-201ENST00000449447 1844 ntBASIC3.38□□□□□ -1.87
USP18Q9UMW8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.38□□□□□ -1.87
USP18Q9UMW8 RNU6-17P-201ENST00000384245 107 ntBASIC3.38□□□□□ -1.87
USP18Q9UMW8 RNU6-18P-201ENST00000384527 107 ntBASIC3.38□□□□□ -1.87
USP18Q9UMW8 RNU6-1222P-201ENST00000384615 107 ntBASIC3.38□□□□□ -1.87
USP18Q9UMW8 RNU4-47P-201ENST00000410876 114 ntBASIC3.38□□□□□ -1.87
USP18Q9UMW8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.38□□□□□ -1.87
USP18Q9UMW8 AC009296.1-201ENST00000443146 155 ntBASIC3.38□□□□□ -1.87
USP18Q9UMW8 AL353705.4-201ENST00000449661 238 ntBASIC3.38□□□□□ -1.87
USP18Q9UMW8 AF186996.7-201ENST00000492781 209 ntBASIC3.38□□□□□ -1.87
USP18Q9UMW8 ANXA2P1-201ENST00000505539 926 ntBASIC3.38□□□□□ -1.87
USP18Q9UMW8 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.38□□□□□ -1.87
USP18Q9UMW8 RNU5B-3P-201ENST00000516601 115 ntBASIC3.38□□□□□ -1.87
USP18Q9UMW8 AC093331.1-201ENST00000521474 169 ntBASIC3.38□□□□□ -1.87
USP18Q9UMW8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.38□□□□□ -1.87
USP18Q9UMW8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.38□□□□□ -1.87
USP18Q9UMW8 AC006006.1-201ENST00000603082 144 ntBASIC3.38□□□□□ -1.87
USP18Q9UMW8 RMST_6.1-201ENST00000611980 203 ntBASIC3.38□□□□□ -1.87
USP18Q9UMW8 AL159153.1-201ENST00000619688 317 ntBASIC3.38□□□□□ -1.87
USP18Q9UMW8 AC091903.1-201ENST00000624322 454 ntBASIC3.38□□□□□ -1.87
USP18Q9UMW8 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.38□□□□□ -1.87
USP18Q9UMW8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP18Q9UMW8 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP18Q9UMW8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.37□□□□□ -1.87
USP18Q9UMW8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
USP18Q9UMW8 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
USP18Q9UMW8 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
USP18Q9UMW8 RNA5SP383-201ENST00000362934 120 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 RNU6-238P-201ENST00000363313 106 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 RNU6-1285P-201ENST00000363480 105 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 SNORD56.3-201ENST00000363507 71 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 Y_RNA.214-201ENST00000364201 112 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 Y_RNA.358-201ENST00000365491 99 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 RNU6-142P-201ENST00000384019 107 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 RNU6-708P-201ENST00000384217 107 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 SNORA51.11-201ENST00000384442 131 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 MIR628-201ENST00000385229 95 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 AL365496.1-201ENST00000426885 215 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 AC078809.1-201ENST00000427601 140 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 RPL23AP22-201ENST00000437556 453 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 OSTCP8-201ENST00000445117 448 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.37□□□□□ -1.87
USP18Q9UMW8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.37□□□□□ -1.87
USP18Q9UMW8 RNU1-143P-201ENST00000516296 146 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 MIR2355-201ENST00000517199 87 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 AL442163.3-201ENST00000554110 156 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.37□□□□□ -1.87
USP18Q9UMW8 MYL12BP1-201ENST00000569826 507 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 RPS29P30-201ENST00000600975 111 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 AL355877.2-201ENST00000603670 358 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 U1.23-201ENST00000610293 146 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 AC107871.2-201ENST00000612894 502 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 RNU1-68P-201ENST00000615382 146 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 U1.39-201ENST00000621562 146 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 AC007792.1-201ENST00000623023 402 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 AL450472.1-202ENST00000637286 180 ntBASIC3.37□□□□□ -1.87
USP18Q9UMW8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP18Q9UMW8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP18Q9UMW8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
USP18Q9UMW8 AL021368.2-201ENST00000606125 5352 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP18Q9UMW8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
USP18Q9UMW8 Y_RNA.27-201ENST00000362540 103 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 U3.13-201ENST00000364804 214 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 RNU6-702P-201ENST00000364982 107 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP18Q9UMW8 RPL21P75-201ENST00000396599 483 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 RPL21P28-201ENST00000401418 483 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 MIR1261-201ENST00000408659 82 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 AL590556.1-201ENST00000423231 483 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms