Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AL731563.1-201ENST00000442202 214 ntBASIC3.93□□□□□ -1.78
DDX41Q9UJV9 DYNLT3P2-201ENST00000442517 295 ntBASIC3.93□□□□□ -1.78
DDX41Q9UJV9 FCF1P4-201ENST00000448326 183 ntBASIC3.93□□□□□ -1.78
DDX41Q9UJV9 RN7SL807P-201ENST00000470923 297 ntBASIC3.93□□□□□ -1.78
DDX41Q9UJV9 AP000870.1-201ENST00000472927 406 ntBASIC3.93□□□□□ -1.78
DDX41Q9UJV9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.93□□□□□ -1.78
DDX41Q9UJV9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.93□□□□□ -1.78
DDX41Q9UJV9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.93□□□□□ -1.78
DDX41Q9UJV9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.93□□□□□ -1.78
DDX41Q9UJV9 RNA5SP54-201ENST00000516951 92 ntBASIC3.93□□□□□ -1.78
DDX41Q9UJV9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.93□□□□□ -1.78
DDX41Q9UJV9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.93□□□□□ -1.78
DDX41Q9UJV9 AC073410.2-201ENST00000603240 332 ntBASIC3.93□□□□□ -1.78
DDX41Q9UJV9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
DDX41Q9UJV9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.93□□□□□ -1.78
DDX41Q9UJV9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
DDX41Q9UJV9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 MIR148B-201ENST00000362252 99 ntBASIC3.92□□□□□ -1.78
DDX41Q9UJV9 RNU6-708P-201ENST00000384217 107 ntBASIC3.92□□□□□ -1.78
DDX41Q9UJV9 SNORD78.2-201ENST00000391076 69 ntBASIC3.92□□□□□ -1.78
DDX41Q9UJV9 Y_RNA.618-201ENST00000410949 107 ntBASIC3.92□□□□□ -1.78
DDX41Q9UJV9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 RN7SL594P-201ENST00000470590 287 ntBASIC3.92□□□□□ -1.78
DDX41Q9UJV9 RNU6-397P-201ENST00000516226 104 ntBASIC3.92□□□□□ -1.78
DDX41Q9UJV9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 AP006245.1-201ENST00000522549 120 ntBASIC3.92□□□□□ -1.78
DDX41Q9UJV9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 CYP4A27P-201ENST00000567218 190 ntBASIC3.92□□□□□ -1.78
DDX41Q9UJV9 AC090517.1-201ENST00000569307 266 ntBASIC3.92□□□□□ -1.78
DDX41Q9UJV9 MIR3923-201ENST00000579521 83 ntBASIC3.92□□□□□ -1.78
DDX41Q9UJV9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 AC006006.1-201ENST00000603082 144 ntBASIC3.92□□□□□ -1.78
DDX41Q9UJV9 RAC1P9-201ENST00000604990 392 ntBASIC3.92□□□□□ -1.78
DDX41Q9UJV9 AC099778.2-201ENST00000610904 211 ntBASIC3.92□□□□□ -1.78
DDX41Q9UJV9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 AC005296.1-201ENST00000616145 209 ntBASIC3.92□□□□□ -1.78
DDX41Q9UJV9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
DDX41Q9UJV9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
DDX41Q9UJV9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.91□□□□□ -1.78
DDX41Q9UJV9 AL356274.2-201ENST00000624379 3752 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 RNU6-770P-201ENST00000363929 105 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 RNU6-611P-201ENST00000384276 104 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 MIR634-201ENST00000385208 97 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 RPL21P1-201ENST00000399532 476 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 SNORA11.2-201ENST00000408318 127 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.91□□□□□ -1.78
DDX41Q9UJV9 RPS15AP7-201ENST00000439294 405 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 RPEP5-201ENST00000441137 268 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 snoU13.6-201ENST00000458785 104 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 U8.22-201ENST00000459141 133 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 snoU13.14-201ENST00000459372 104 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 AC021205.2-201ENST00000480069 347 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 HMGB1P35-201ENST00000503360 598 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 SNORA31.16-201ENST00000516773 139 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 RNU6-897P-201ENST00000517135 105 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 RNU6-58P-201ENST00000517143 103 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 RN7SKP57-201ENST00000517248 293 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 IGHV3-76-201ENST00000522465 295 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.91□□□□□ -1.78
DDX41Q9UJV9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
DDX41Q9UJV9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.91□□□□□ -1.78
DDX41Q9UJV9 AC011471.1-201ENST00000585766 187 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 AL109809.4-201ENST00000603520 2185 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 YPEL5P2-201ENST00000605553 359 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 Y_RNA.772-201ENST00000606692 102 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.91□□□□□ -1.78
DDX41Q9UJV9 AC130454.1-201ENST00000622948 401 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
DDX41Q9UJV9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
DDX41Q9UJV9 MFSD8-233ENST00000641482 4860 ntBASIC3.91□□□□□ -1.78
DDX41Q9UJV9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
DDX41Q9UJV9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.9□□□□□ -1.78
DDX41Q9UJV9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.9□□□□□ -1.78
DDX41Q9UJV9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
DDX41Q9UJV9 AL021368.2-201ENST00000606125 5352 ntBASIC3.9□□□□□ -1.78
DDX41Q9UJV9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.9□□□□□ -1.78
DDX41Q9UJV9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
DDX41Q9UJV9 RNU6-529P-201ENST00000363383 104 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 SNORD115-8-201ENST00000363856 82 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 Y_RNA.183-201ENST00000363882 113 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 RNU6-280P-201ENST00000364145 104 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 Y_RNA.214-201ENST00000364201 112 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 SNORD115-38-201ENST00000365037 82 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 Y_RNA.439-201ENST00000384119 94 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 U8.10-201ENST00000384260 133 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 U3.26-201ENST00000391236 204 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 NDUFB4P4-201ENST00000404822 243 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 MIR320B2-201ENST00000408479 138 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms