Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 RPL21P111-201ENST00000418453 477 ntBASIC0.52□□□□□ -2.33
PHRF1Q9P1Y6 AC123900.1-201ENST00000420390 96 ntBASIC0.52□□□□□ -2.33
PHRF1Q9P1Y6 AC006366.1-201ENST00000422002 759 ntBASIC0.52□□□□□ -2.33
PHRF1Q9P1Y6 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.52□□□□□ -2.33
PHRF1Q9P1Y6 AC130509.1-201ENST00000464158 433 ntBASIC0.52□□□□□ -2.33
PHRF1Q9P1Y6 MTCO3P27-201ENST00000514397 196 ntBASIC0.52□□□□□ -2.33
PHRF1Q9P1Y6 ACA64.5-201ENST00000516207 127 ntBASIC0.52□□□□□ -2.33
PHRF1Q9P1Y6 RNU5A-4P-201ENST00000516588 111 ntBASIC0.52□□□□□ -2.33
PHRF1Q9P1Y6 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.52□□□□□ -2.33
PHRF1Q9P1Y6 EIF4A1P12-201ENST00000551910 141 ntBASIC0.52□□□□□ -2.33
PHRF1Q9P1Y6 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.52□□□□□ -2.33
PHRF1Q9P1Y6 AC025678.1-201ENST00000567861 338 ntBASIC0.52□□□□□ -2.33
PHRF1Q9P1Y6 RMST_4.1-201ENST00000616886 107 ntBASIC0.52□□□□□ -2.33
PHRF1Q9P1Y6 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.52□□□□□ -2.33
PHRF1Q9P1Y6 AC027335.2-201ENST00000624030 375 ntBASIC0.52□□□□□ -2.33
PHRF1Q9P1Y6 RNU6-23P-201ENST00000363283 107 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 Y_RNA.132-201ENST00000363421 102 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 RNU6-438P-201ENST00000365561 103 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 RNU6-224P-201ENST00000384055 107 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 SNX2P2-201ENST00000424553 323 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 AC007327.1-201ENST00000447461 264 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 RNU7-40P-201ENST00000516397 64 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 RNU6-1092P-201ENST00000516955 87 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 AC090115.3-201ENST00000553218 849 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 MTND3P13-201ENST00000574391 343 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 MIR4661-201ENST00000582720 75 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 AL136363.2-201ENST00000604173 851 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 AC007363.1-201ENST00000604736 620 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 AP000860.1-201ENST00000605250 559 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 AC018889.1-201ENST00000605372 397 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 AC099785.1-201ENST00000605697 437 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 AC126177.8-201ENST00000618339 1015 ntBASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
PHRF1Q9P1Y6 MIR302D-201ENST00000362275 68 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 RNU6-1285P-201ENST00000363480 105 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 RNU6-777P-201ENST00000364265 104 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 RNY3P13-201ENST00000365542 102 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 RNU6-142P-201ENST00000384019 107 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 SNORA50A-201ENST00000384225 134 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 RNA5SP299-201ENST00000391203 116 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 AL589872.1-201ENST00000426602 288 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 LARP1BP3-201ENST00000437229 869 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 MTND2P4-201ENST00000445034 1004 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 TRBVA-201ENST00000498804 316 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 AC109445.1-201ENST00000512356 383 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 RNU4-57P-201ENST00000515980 135 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 AC109446.1-201ENST00000566172 220 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 MIR4636-201ENST00000582271 80 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 AC008751.2-201ENST00000597885 980 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 BNIP3P31-201ENST00000604515 566 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 AC063943.3-201ENST00000615562 356 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 AC068205.3-201ENST00000636385 468 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 AC010615.1-201ENST00000594254 1764 ntBASIC0.5□□□□□ -2.33
PHRF1Q9P1Y6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 FCF1P10-201ENST00000407590 479 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 RNU6-1054P-201ENST00000411293 104 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 ELOCP17-201ENST00000414751 326 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 ELOCP9-201ENST00000418624 239 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 TXNL1P1-201ENST00000429528 554 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 OR2AQ1P-201ENST00000451972 200 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 AC006026.2-201ENST00000457376 180 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 AC005741.1-201ENST00000511094 432 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 RNU6-914P-201ENST00000516749 109 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 RNA5SP481-201ENST00000516814 122 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 RNU6-677P-201ENST00000516914 101 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 CYP3A52P-201ENST00000563326 91 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 AC136932.1-201ENST00000574771 208 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 AC024940.5-201ENST00000622889 474 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 AL356596.1-201ENST00000624230 379 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 AC073343.1-201ENST00000328239 651 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 RNY4P24-201ENST00000362735 96 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 RNU6-862P-201ENST00000362804 105 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 RNU6-371P-201ENST00000364283 108 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 MIR544A-201ENST00000384855 91 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 MIR329-2-201ENST00000385029 84 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 SNORA40.2-201ENST00000390847 128 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 AC069282.1-201ENST00000411911 526 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 MTCO3P41-201ENST00000414801 328 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 MTND4P20-201ENST00000424125 869 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 AP000542.1-201ENST00000448473 371 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 RPL31P3-201ENST00000458430 332 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 AC022447.4-201ENST00000504053 364 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 AC097473.1-201ENST00000508142 408 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 MTND3P5-201ENST00000512798 333 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 HMGB1P33-201ENST00000563485 527 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms