Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC59Q9P031 RPL23AP95-201ENST00000426806 265 ntBASIC1.31□□□□□ -2.2
CCDC59Q9P031 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC59Q9P031 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.31□□□□□ -2.2
CCDC59Q9P031 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.31□□□□□ -2.2
CCDC59Q9P031 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.31□□□□□ -2.2
CCDC59Q9P031 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC59Q9P031 AMD1P1-201ENST00000457220 922 ntBASIC1.31□□□□□ -2.2
CCDC59Q9P031 GMFBP1-201ENST00000467831 427 ntBASIC1.31□□□□□ -2.2
CCDC59Q9P031 AC016632.1-201ENST00000503994 196 ntBASIC1.31□□□□□ -2.2
CCDC59Q9P031 AC079140.5-201ENST00000507882 310 ntBASIC1.31□□□□□ -2.2
CCDC59Q9P031 AC091874.1-201ENST00000511402 339 ntBASIC1.31□□□□□ -2.2
CCDC59Q9P031 RNA5SP182-201ENST00000516064 82 ntBASIC1.31□□□□□ -2.2
CCDC59Q9P031 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.31□□□□□ -2.2
CCDC59Q9P031 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.31□□□□□ -2.2
CCDC59Q9P031 MTCO3P23-201ENST00000561363 289 ntBASIC1.31□□□□□ -2.2
CCDC59Q9P031 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.31□□□□□ -2.2
CCDC59Q9P031 MTND4P14-201ENST00000435799 1354 ntBASIC1.31□□□□□ -2.2
CCDC59Q9P031 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC59Q9P031 RNU4-82P-201ENST00000362443 140 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 RNU6-552P-201ENST00000362869 119 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 RNU6-378P-201ENST00000384324 107 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 Y_RNA.504-201ENST00000384481 104 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 RNU6-296P-201ENST00000384608 107 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 RNU6-606P-201ENST00000384721 111 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 RNU2-9P-201ENST00000410194 145 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 RPL30P13-201ENST00000418873 348 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC59Q9P031 AL445567.1-201ENST00000439121 144 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 MTCO1P44-201ENST00000441935 243 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC59Q9P031 RPS27AP8-201ENST00000452665 445 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC59Q9P031 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
CCDC59Q9P031 snoU13.9-201ENST00000458927 103 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 RNU7-14P-201ENST00000459331 62 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 TOMM22P6-201ENST00000465035 409 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 RNU6-1098P-201ENST00000516772 96 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 SUMO2P18-201ENST00000518873 252 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC59Q9P031 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC59Q9P031 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC59Q9P031 MIR4255-201ENST00000579351 72 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 AP001485.1-201ENST00000604799 199 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 AL603755.1-201ENST00000619504 163 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 AC136475.10-201ENST00000620253 385 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 AC068205.3-201ENST00000636385 468 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 AL450472.1-202ENST00000637286 180 ntBASIC1.3□□□□□ -2.2
CCDC59Q9P031 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CCDC59Q9P031 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CCDC59Q9P031 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC59Q9P031 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC59Q9P031 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
CCDC59Q9P031 Y_RNA.67-201ENST00000362870 100 ntBASIC1.29□□□□□ -2.2
CCDC59Q9P031 RNU4-91P-201ENST00000364778 135 ntBASIC1.29□□□□□ -2.2
CCDC59Q9P031 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC59Q9P031 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC59Q9P031 AC244505.5-201ENST00000443639 207 ntBASIC1.29□□□□□ -2.2
CCDC59Q9P031 RPL31P3-201ENST00000458430 332 ntBASIC1.29□□□□□ -2.2
CCDC59Q9P031 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.29□□□□□ -2.2
CCDC59Q9P031 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC59Q9P031 RNU5F-4P-201ENST00000516581 114 ntBASIC1.29□□□□□ -2.2
CCDC59Q9P031 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC59Q9P031 EIF4A1P12-201ENST00000551910 141 ntBASIC1.29□□□□□ -2.2
CCDC59Q9P031 SUB1P3-201ENST00000564581 315 ntBASIC1.29□□□□□ -2.2
CCDC59Q9P031 MTATP6P24-201ENST00000576835 677 ntBASIC1.29□□□□□ -2.2
CCDC59Q9P031 MIR3913-1-201ENST00000577744 102 ntBASIC1.29□□□□□ -2.2
CCDC59Q9P031 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.29□□□□□ -2.2
CCDC59Q9P031 VN1R80P-201ENST00000597126 338 ntBASIC1.29□□□□□ -2.2
CCDC59Q9P031 Z98751.3-201ENST00000604447 521 ntBASIC1.29□□□□□ -2.2
CCDC59Q9P031 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC59Q9P031 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.29□□□□□ -2.2
CCDC59Q9P031 AC091931.1-201ENST00000623488 728 ntBASIC1.29□□□□□ -2.2
CCDC59Q9P031 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.29□□□□□ -2.2
CCDC59Q9P031 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.29□□□□□ -2.2
CCDC59Q9P031 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC59Q9P031 RNU6-414P-201ENST00000363705 104 ntBASIC1.28□□□□□ -2.2
CCDC59Q9P031 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.28□□□□□ -2.2
CCDC59Q9P031 SNORA36A-201ENST00000384221 132 ntBASIC1.28□□□□□ -2.2
CCDC59Q9P031 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
CCDC59Q9P031 MIR758-201ENST00000390227 88 ntBASIC1.28□□□□□ -2.2
CCDC59Q9P031 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
CCDC59Q9P031 SNORA3.2-201ENST00000408221 125 ntBASIC1.28□□□□□ -2.2
CCDC59Q9P031 RNU2-29P-201ENST00000410423 189 ntBASIC1.28□□□□□ -2.2
CCDC59Q9P031 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC59Q9P031 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC59Q9P031 AC015922.2-201ENST00000435593 184 ntBASIC1.28□□□□□ -2.2
CCDC59Q9P031 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.28□□□□□ -2.2
CCDC59Q9P031 AC007547.1-201ENST00000462177 490 ntBASIC1.28□□□□□ -2.2
CCDC59Q9P031 HMGN1P13-201ENST00000505795 138 ntBASIC1.28□□□□□ -2.2
CCDC59Q9P031 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC59Q9P031 AC069113.1-201ENST00000517763 267 ntBASIC1.28□□□□□ -2.2
CCDC59Q9P031 AP003034.1-201ENST00000534621 422 ntBASIC1.28□□□□□ -2.2
CCDC59Q9P031 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC59Q9P031 SUB1P2-201ENST00000556401 297 ntBASIC1.28□□□□□ -2.2
CCDC59Q9P031 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC59Q9P031 CYP4A27P-201ENST00000567218 190 ntBASIC1.28□□□□□ -2.2
CCDC59Q9P031 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC59Q9P031 MIR4422-201ENST00000581938 83 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms