Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC034114.1-201ENST00000520293 285 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.04□□□□□ -2.08
HPS4Q9NQG7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.04□□□□□ -2.08
HPS4Q9NQG7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.04□□□□□ -2.08
HPS4Q9NQG7 AC104383.1-201ENST00000530297 370 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.04□□□□□ -2.08
HPS4Q9NQG7 AC233702.2-202ENST00000562547 291 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 TPRKBP2-201ENST00000565969 475 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 AC091135.1-201ENST00000585943 307 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 SNRPGP19-201ENST00000603826 189 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 ELOCP5-201ENST00000604924 333 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 AC004492.1-201ENST00000607036 742 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 AC084782.3-201ENST00000612282 578 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 AC073534.2-201ENST00000620377 381 ntBASIC2.04□□□□□ -2.08
HPS4Q9NQG7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
HPS4Q9NQG7 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 snoU2_19.1-201ENST00000362361 80 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 RNU6-428P-201ENST00000362942 107 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 RNU6-266P-201ENST00000364225 107 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 U3.13-201ENST00000364804 214 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 RNA5SP160-201ENST00000364866 120 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 RNU6-1222P-201ENST00000384615 107 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
HPS4Q9NQG7 SNORA40.18-201ENST00000391200 128 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 RNU6-293P-201ENST00000411259 106 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.03□□□□□ -2.08
HPS4Q9NQG7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.03□□□□□ -2.08
HPS4Q9NQG7 HMGB1P18-201ENST00000438801 619 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 AC243964.1-201ENST00000441814 261 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.03□□□□□ -2.08
HPS4Q9NQG7 RPL23AP3-201ENST00000453844 468 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 RNU7-167P-201ENST00000459160 62 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 AL163973.1-201ENST00000484753 577 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.03□□□□□ -2.08
HPS4Q9NQG7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.03□□□□□ -2.08
HPS4Q9NQG7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.03□□□□□ -2.08
HPS4Q9NQG7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.03□□□□□ -2.08
HPS4Q9NQG7 AP003034.1-201ENST00000534621 422 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.03□□□□□ -2.08
HPS4Q9NQG7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.03□□□□□ -2.08
HPS4Q9NQG7 MIR5089-201ENST00000580047 84 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.03□□□□□ -2.08
HPS4Q9NQG7 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.03□□□□□ -2.08
HPS4Q9NQG7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
HPS4Q9NQG7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
HPS4Q9NQG7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
HPS4Q9NQG7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
HPS4Q9NQG7 RNU6-1085P-201ENST00000363576 107 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 RNU6-1090P-201ENST00000364065 94 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 Y_RNA.255-201ENST00000364581 97 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 AL033519.2-201ENST00000403958 392 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 MIR548F1-201ENST00000408667 84 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 RNU6-1245P-201ENST00000411130 106 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.02□□□□□ -2.09
HPS4Q9NQG7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.02□□□□□ -2.09
HPS4Q9NQG7 AC013470.1-201ENST00000453438 462 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 AC083798.1-201ENST00000472671 131 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 Y_RNA.693-201ENST00000516641 110 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 RN7SKP256-201ENST00000517201 314 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 AC107953.1-201ENST00000522216 297 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 AL512360.1-201ENST00000555346 234 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.02□□□□□ -2.09
HPS4Q9NQG7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.02□□□□□ -2.09
HPS4Q9NQG7 MIR3941-201ENST00000582572 103 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.02□□□□□ -2.09
HPS4Q9NQG7 Z82243.1-201ENST00000609432 473 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 U2.17-201ENST00000611454 95 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 AC098657.3-201ENST00000620434 263 ntBASIC2.02□□□□□ -2.09
HPS4Q9NQG7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.02□□□□□ -2.09
HPS4Q9NQG7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.01□□□□□ -2.09
HPS4Q9NQG7 RNU6-944P-201ENST00000364023 107 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 RNU6-336P-201ENST00000364891 107 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 SNORA69-201ENST00000383895 132 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 Y_RNA.505-201ENST00000384489 102 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 MIR29B2-201ENST00000385055 81 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 RNU6-192P-201ENST00000391253 100 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 RNU2-48P-201ENST00000410694 191 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 RNU2-32P-201ENST00000411193 191 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 AL030996.1-201ENST00000411430 235 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.01□□□□□ -2.09
HPS4Q9NQG7 USP9YP18-201ENST00000425912 695 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.01□□□□□ -2.09
HPS4Q9NQG7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.01□□□□□ -2.09
HPS4Q9NQG7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.01□□□□□ -2.09
HPS4Q9NQG7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.01□□□□□ -2.09
HPS4Q9NQG7 RNA5SP364-201ENST00000516938 78 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 RNU6-835P-201ENST00000516974 104 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 RNU6-667P-201ENST00000517186 102 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 MTND4P7-201ENST00000523876 130 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 AP000763.2-201ENST00000540641 163 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 HMGB1P33-201ENST00000563485 527 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 BNIP3P16-201ENST00000589779 534 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 AL031274.2-201ENST00000599419 203 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 uc_338.34-201ENST00000617467 174 ntBASIC2.01□□□□□ -2.09
HPS4Q9NQG7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
HPS4Q9NQG7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
HPS4Q9NQG7 RNU6-1285P-201ENST00000363480 105 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 477.5 ms