Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CYCSP48-201ENST00000417124 323 ntBASIC3.77□□□□□ -1.81
SSU72Q9NP77 SEPT7P4-201ENST00000437076 306 ntBASIC3.77□□□□□ -1.81
SSU72Q9NP77 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.77□□□□□ -1.81
SSU72Q9NP77 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.77□□□□□ -1.81
SSU72Q9NP77 RNA5SP208-201ENST00000516156 78 ntBASIC3.77□□□□□ -1.81
SSU72Q9NP77 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.77□□□□□ -1.81
SSU72Q9NP77 TGIF1P1-201ENST00000558095 802 ntBASIC3.77□□□□□ -1.81
SSU72Q9NP77 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.77□□□□□ -1.81
SSU72Q9NP77 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.77□□□□□ -1.81
SSU72Q9NP77 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.77□□□□□ -1.81
SSU72Q9NP77 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.77□□□□□ -1.81
SSU72Q9NP77 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSU72Q9NP77 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSU72Q9NP77 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SSU72Q9NP77 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SSU72Q9NP77 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SSU72Q9NP77 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.76□□□□□ -1.81
SSU72Q9NP77 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SSU72Q9NP77 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
SSU72Q9NP77 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.76□□□□□ -1.81
SSU72Q9NP77 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
SSU72Q9NP77 Y_RNA.23-201ENST00000362496 106 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 Y_RNA.40-201ENST00000362645 93 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 RNU6-529P-201ENST00000363383 104 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 RNA5SP505-201ENST00000364748 108 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 SNORD50B-201ENST00000364995 70 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 RNU6-449P-201ENST00000383914 107 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 RNU6-1310P-201ENST00000384153 107 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 RNU6-763P-201ENST00000390865 106 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 U3.22-201ENST00000391120 215 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 U3.40-201ENST00000408706 208 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 RNU6-735P-201ENST00000410612 107 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.76□□□□□ -1.81
SSU72Q9NP77 AC006466.1-201ENST00000438721 289 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 AL161651.1-201ENST00000440882 223 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 RPS27AP9-201ENST00000477681 438 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.76□□□□□ -1.81
SSU72Q9NP77 AC108043.1-201ENST00000512696 574 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 RNA5SP164-201ENST00000516533 110 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 AC100767.1-201ENST00000528178 123 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SSU72Q9NP77 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.76□□□□□ -1.81
SSU72Q9NP77 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.76□□□□□ -1.81
SSU72Q9NP77 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.76□□□□□ -1.81
SSU72Q9NP77 AL356218.2-201ENST00000605264 187 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 SNORA62.6-201ENST00000606322 83 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SSU72Q9NP77 AC000403.1-201ENST00000613696 3585 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SSU72Q9NP77 AC002543.1-201ENST00000299783 1954 ntBASIC3.76□□□□□ -1.81
SSU72Q9NP77 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SSU72Q9NP77 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SSU72Q9NP77 FAM35BP-202ENST00000497389 3337 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 Y_RNA.215-201ENST00000364204 112 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SSU72Q9NP77 Y_RNA.415-201ENST00000384012 112 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 RNA5SP424-201ENST00000390988 115 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 Y_RNA.586-201ENST00000391146 98 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 EI24P2-201ENST00000397776 1076 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 MIR208B-201ENST00000401172 77 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 AL133475.1-201ENST00000404414 305 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 RNA5SP201-201ENST00000410316 124 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 TBCAP1-201ENST00000436520 327 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.75□□□□□ -1.81
SSU72Q9NP77 RNA5SP310-201ENST00000459084 116 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 AC084357.1-201ENST00000473404 255 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 PPIAP15-201ENST00000479662 484 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.75□□□□□ -1.81
SSU72Q9NP77 RNA5SP272-201ENST00000516095 111 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 RNU6-479P-201ENST00000516348 105 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 SNORD116-25-201ENST00000516517 92 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 AC115990.1-201ENST00000526957 301 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.75□□□□□ -1.81
SSU72Q9NP77 AP004242.1-201ENST00000533701 349 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 RN7SL600P-201ENST00000581811 299 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 AC091152.3-201ENST00000604227 325 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 MIR6719-201ENST00000622428 87 ntBASIC3.75□□□□□ -1.81
SSU72Q9NP77 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SSU72Q9NP77 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SSU72Q9NP77 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.75□□□□□ -1.81
SSU72Q9NP77 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SSU72Q9NP77 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SSU72Q9NP77 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.75□□□□□ -1.81
SSU72Q9NP77 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SSU72Q9NP77 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSU72Q9NP77 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SSU72Q9NP77 Y_RNA.121-201ENST00000363309 113 ntBASIC3.74□□□□□ -1.81
SSU72Q9NP77 RNA5SP167-201ENST00000365461 116 ntBASIC3.74□□□□□ -1.81
SSU72Q9NP77 SNORA18.3-201ENST00000384122 132 ntBASIC3.74□□□□□ -1.81
SSU72Q9NP77 Y_RNA.488-201ENST00000384403 102 ntBASIC3.74□□□□□ -1.81
SSU72Q9NP77 SNORA22C-201ENST00000384614 134 ntBASIC3.74□□□□□ -1.81
SSU72Q9NP77 RNA5SP475-201ENST00000410568 110 ntBASIC3.74□□□□□ -1.81
SSU72Q9NP77 NDUFB1P1-201ENST00000435191 180 ntBASIC3.74□□□□□ -1.81
SSU72Q9NP77 AL772161.1-201ENST00000439130 476 ntBASIC3.74□□□□□ -1.81
SSU72Q9NP77 AC012308.1-201ENST00000451232 178 ntBASIC3.74□□□□□ -1.81
SSU72Q9NP77 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.74□□□□□ -1.81
SSU72Q9NP77 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.74□□□□□ -1.81
SSU72Q9NP77 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.74□□□□□ -1.81
SSU72Q9NP77 MIR3136-201ENST00000583498 78 ntBASIC3.74□□□□□ -1.81
SSU72Q9NP77 AL137843.1-201ENST00000605078 385 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms