Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.22□□□□□ -1.73
ZFYVE28Q9HCC9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.22□□□□□ -1.73
ZFYVE28Q9HCC9 SETP5-201ENST00000437270 562 ntBASIC4.22□□□□□ -1.73
ZFYVE28Q9HCC9 POLR2KP2-201ENST00000438155 177 ntBASIC4.22□□□□□ -1.73
ZFYVE28Q9HCC9 SNORA27.4-201ENST00000516650 95 ntBASIC4.22□□□□□ -1.73
ZFYVE28Q9HCC9 RNA5SP309-201ENST00000516670 106 ntBASIC4.22□□□□□ -1.73
ZFYVE28Q9HCC9 AC115990.1-201ENST00000526957 301 ntBASIC4.22□□□□□ -1.73
ZFYVE28Q9HCC9 AL137843.1-201ENST00000605078 385 ntBASIC4.22□□□□□ -1.73
ZFYVE28Q9HCC9 AP000553.6-201ENST00000641242 118 ntBASIC4.22□□□□□ -1.73
ZFYVE28Q9HCC9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ZFYVE28Q9HCC9 AC010733.2-201ENST00000589496 5702 ntBASIC4.22□□□□□ -1.73
ZFYVE28Q9HCC9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ZFYVE28Q9HCC9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ZFYVE28Q9HCC9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ZFYVE28Q9HCC9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
ZFYVE28Q9HCC9 RBBP8P1-201ENST00000449447 1844 ntBASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 AC004944.1-201ENST00000517807 3059 ntBASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 RNU6-622P-201ENST00000384272 103 ntBASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 SNORA46.1-201ENST00000391069 153 ntBASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 SNORA26.3-201ENST00000391119 136 ntBASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 AC019205.3-201ENST00000424573 156 ntBASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 AC112220.1-201ENST00000434628 355 ntBASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 AP000705.1-201ENST00000454567 350 ntBASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 UBE2DNL-203ENST00000474922 222 ntBASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 AC091959.1-201ENST00000495857 238 ntBASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 SNORD116-28-201ENST00000516123 91 ntBASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 RNU6-1212P-201ENST00000517023 104 ntBASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 MIR4282-201ENST00000583613 67 ntBASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 MIR4727-201ENST00000622232 55 ntBASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 AC073073.2-201ENST00000609827 2578 ntBASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
ZFYVE28Q9HCC9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 AC007496.3-201ENST00000624987 3443 ntBASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 UBE2WP1-201ENST00000362030 340 ntBASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 RNU4-35P-201ENST00000362588 141 ntBASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 SNORA72.2-201ENST00000365028 127 ntBASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.446-201ENST00000384178 104 ntBASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.638-201ENST00000459374 113 ntBASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 AC025518.1-201ENST00000479856 347 ntBASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.683-201ENST00000516508 93 ntBASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 KLKP1-201ENST00000595979 403 ntBASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 AC010620.2-201ENST00000600135 313 ntBASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 AC072026.1-201ENST00000605023 201 ntBASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 AC012531.5-201ENST00000611375 151 ntBASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZFYVE28Q9HCC9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.82-201ENST00000363000 102 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.92-201ENST00000363043 102 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.136-201ENST00000363444 102 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 RNU6-682P-201ENST00000363843 106 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.179-201ENST00000363844 90 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.235-201ENST00000364412 102 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.306-201ENST00000365015 102 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.312-201ENST00000365089 102 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.322-201ENST00000365151 102 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.383-201ENST00000383855 97 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 RNU6-651P-201ENST00000411040 105 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 AC138623.1-201ENST00000418060 216 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 AL161651.1-201ENST00000440882 223 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.650-201ENST00000459002 102 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 SNORA70.18-201ENST00000516696 98 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 RNU6-861P-201ENST00000516745 106 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.777-201ENST00000516982 102 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 AC233702.2-202ENST00000562547 291 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.771-201ENST00000598668 102 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 MIR7112-201ENST00000616126 65 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 Y_RNA.789-201ENST00000622480 102 ntBASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ZFYVE28Q9HCC9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms