Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RNU6-1281P-201ENST00000516223 105 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 SNORD60.2-201ENST00000516883 86 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 SNORA48.11-201ENST00000517015 89 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 FO082796.1-201ENST00000523795 183 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.82□□□□□ -2.12
NXF3Q9H4D5 CBX3P4-201ENST00000538909 354 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.82□□□□□ -2.12
NXF3Q9H4D5 AC090115.3-201ENST00000553218 849 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.82□□□□□ -2.12
NXF3Q9H4D5 AC104581.2-201ENST00000572227 430 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 MIR3126-201ENST00000577443 74 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 MIR4303-201ENST00000581299 66 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 AL162413.1-201ENST00000603198 110 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 AL355297.2-201ENST00000604792 129 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 U2.17-201ENST00000611454 95 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
NXF3Q9H4D5 AC009233.1-201ENST00000616477 371 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 U4.5-201ENST00000617137 123 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.82□□□□□ -2.12
NXF3Q9H4D5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.82□□□□□ -2.12
NXF3Q9H4D5 MIR3529-201ENST00000637713 78 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 MIR1321-201ENST00000637766 79 ntBASIC1.82□□□□□ -2.12
NXF3Q9H4D5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
NXF3Q9H4D5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.81□□□□□ -2.12
NXF3Q9H4D5 RNU6-661P-201ENST00000362409 107 ntBASIC1.81□□□□□ -2.12
NXF3Q9H4D5 RNU6-858P-201ENST00000362436 107 ntBASIC1.81□□□□□ -2.12
NXF3Q9H4D5 RNU6-82P-201ENST00000363970 107 ntBASIC1.81□□□□□ -2.12
NXF3Q9H4D5 RNU6-487P-201ENST00000365430 104 ntBASIC1.81□□□□□ -2.12
NXF3Q9H4D5 RNU6-908P-201ENST00000410160 94 ntBASIC1.81□□□□□ -2.12
NXF3Q9H4D5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.81□□□□□ -2.12
NXF3Q9H4D5 AL161788.1-201ENST00000441805 169 ntBASIC1.81□□□□□ -2.12
NXF3Q9H4D5 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.81□□□□□ -2.12
NXF3Q9H4D5 RNA5SP137-201ENST00000516833 135 ntBASIC1.81□□□□□ -2.12
NXF3Q9H4D5 CBX3P7-201ENST00000532876 502 ntBASIC1.81□□□□□ -2.12
NXF3Q9H4D5 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.81□□□□□ -2.12
NXF3Q9H4D5 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.81□□□□□ -2.12
NXF3Q9H4D5 MIR3618-201ENST00000580330 88 ntBASIC1.81□□□□□ -2.12
NXF3Q9H4D5 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.81□□□□□ -2.12
NXF3Q9H4D5 AC005034.5-201ENST00000604219 466 ntBASIC1.81□□□□□ -2.12
NXF3Q9H4D5 AC012493.3-201ENST00000604494 112 ntBASIC1.81□□□□□ -2.12
NXF3Q9H4D5 Z82243.1-201ENST00000609432 473 ntBASIC1.81□□□□□ -2.12
NXF3Q9H4D5 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
NXF3Q9H4D5 AC098679.4-201ENST00000624241 654 ntBASIC1.81□□□□□ -2.12
NXF3Q9H4D5 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
NXF3Q9H4D5 Y_RNA.6-201ENST00000362350 114 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 SNORD48-201ENST00000364953 64 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 U8.10-201ENST00000384260 133 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 Y_RNA.554-201ENST00000384672 102 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 SNORA40.19-201ENST00000390846 128 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 SNORD37.1-201ENST00000390968 65 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 SNORA67.5-201ENST00000391036 107 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 OR9R1P-201ENST00000412200 877 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 HMGN2P19-201ENST00000425149 265 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.8□□□□□ -2.12
NXF3Q9H4D5 AL365400.1-201ENST00000431854 640 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 HMGB1P31-201ENST00000437242 427 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.8□□□□□ -2.12
NXF3Q9H4D5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.8□□□□□ -2.12
NXF3Q9H4D5 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.8□□□□□ -2.12
NXF3Q9H4D5 MTND3P16-201ENST00000452205 344 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.8□□□□□ -2.12
NXF3Q9H4D5 AC082651.2-201ENST00000496833 166 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 Y_RNA.704-201ENST00000516851 102 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 CENPUP1-201ENST00000526649 1202 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 CYCSP27-201ENST00000527643 293 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 AC023050.3-201ENST00000541142 333 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.8□□□□□ -2.12
NXF3Q9H4D5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.8□□□□□ -2.12
NXF3Q9H4D5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.8□□□□□ -2.12
NXF3Q9H4D5 AC068790.6-201ENST00000602558 258 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 AC002044.1-201ENST00000606707 158 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 AC005296.1-201ENST00000616145 209 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.8□□□□□ -2.12
NXF3Q9H4D5 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.8□□□□□ -2.12
NXF3Q9H4D5 FER-210ENST00000628534 558 ntTSL 5 BASIC1.8□□□□□ -2.12
NXF3Q9H4D5 U4.7-201ENST00000638126 106 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 AC068137.3-201ENST00000639191 341 ntBASIC1.8□□□□□ -2.12
NXF3Q9H4D5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NXF3Q9H4D5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NXF3Q9H4D5 Y_RNA.9-201ENST00000362354 101 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-37P-201ENST00000362692 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-78P-201ENST00000362897 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNY4P14-201ENST00000363656 96 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-266P-201ENST00000364225 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-11P-201ENST00000364234 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU4-66P-201ENST00000365199 138 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU5E-7P-201ENST00000365290 117 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU4-20P-201ENST00000365601 151 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-25P-201ENST00000383873 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-1-201ENST00000383898 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-48P-201ENST00000384161 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-36P-201ENST00000384172 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-4P-201ENST00000384205 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-5P-201ENST00000384238 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-622P-201ENST00000384272 103 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-3P-201ENST00000384314 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-16P-201ENST00000384385 107 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 SNORD116-20-201ENST00000384529 92 ntBASIC1.79□□□□□ -2.12
NXF3Q9H4D5 RNU6-15P-201ENST00000384534 107 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms