Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC68Q9H2F9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC68Q9H2F9 WARS2P1-201ENST00000429678 537 ntBASIC2.34□□□□□ -2.03
CCDC68Q9H2F9 AC132942.1-201ENST00000486753 483 ntBASIC2.34□□□□□ -2.03
CCDC68Q9H2F9 ANXA2P1-201ENST00000505539 926 ntBASIC2.34□□□□□ -2.03
CCDC68Q9H2F9 AC093259.1-201ENST00000509755 300 ntBASIC2.34□□□□□ -2.03
CCDC68Q9H2F9 AC109635.3-201ENST00000529536 185 ntBASIC2.34□□□□□ -2.03
CCDC68Q9H2F9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC68Q9H2F9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC68Q9H2F9 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC68Q9H2F9 Z98751.3-201ENST00000604447 521 ntBASIC2.34□□□□□ -2.03
CCDC68Q9H2F9 SNORA43.4-201ENST00000629559 138 ntBASIC2.34□□□□□ -2.03
CCDC68Q9H2F9 KPNA2P1-201ENST00000458289 1591 ntBASIC2.34□□□□□ -2.03
CCDC68Q9H2F9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 Y_RNA.9-201ENST00000362354 101 ntBASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 RNU6-451P-201ENST00000362921 107 ntBASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 U3.9-201ENST00000363823 204 ntBASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 RNU6-26P-201ENST00000383985 107 ntBASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 UBE2V1P4-201ENST00000425374 344 ntBASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 AP001486.1-201ENST00000463339 476 ntBASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 AC114801.2-201ENST00000503825 781 ntBASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 SCOCP1-201ENST00000554676 349 ntBASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 CYP4A27P-201ENST00000567218 190 ntBASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 AC103810.6-201ENST00000606708 136 ntBASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 AL359314.1-201ENST00000616913 261 ntBASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 AL450472.1-202ENST00000637286 180 ntBASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC68Q9H2F9 AC016717.2-201ENST00000609089 5141 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 RNA5SP276-201ENST00000362580 94 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 RNA5SP37-201ENST00000365420 130 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 Y_RNA.554-201ENST00000384672 102 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 AL357139.1-201ENST00000407792 426 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 RNA5SP201-201ENST00000410316 124 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 AL356379.1-201ENST00000414105 126 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 NDUFA5P4-201ENST00000436704 385 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 AL049873.1-201ENST00000480540 376 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 Y_RNA.665-201ENST00000516177 98 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 AC026371.1-201ENST00000551867 419 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 ZNF519P2-201ENST00000557032 169 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 MIR4287-201ENST00000579398 78 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 AC100830.2-201ENST00000581636 240 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 AC025754.2-201ENST00000606491 432 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 AC064807.4-201ENST00000607201 407 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 PCGEM1.1-201ENST00000613431 131 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 FAM157A-202ENST00000615155 405 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 CTSLP2-204ENST00000629029 392 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 AL136360.1-201ENST00000503377 1900 ntBASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
CCDC68Q9H2F9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 RNU6-1252P-201ENST00000363054 104 ntBASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 RNU6-254P-201ENST00000363377 107 ntBASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 RNU6-234P-201ENST00000365229 104 ntBASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 RNU6-378P-201ENST00000384324 107 ntBASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 MIR17-201ENST00000385012 84 ntBASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 MIR208B-201ENST00000401172 77 ntBASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 RN7SKP284-201ENST00000411002 343 ntBASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 RNA5SP450-201ENST00000411206 102 ntBASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 EIF1AXP1-201ENST00000419267 435 ntBASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 AC012306.1-201ENST00000423267 114 ntBASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 SRIP2-201ENST00000428470 166 ntBASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 RPS29P27-201ENST00000463711 170 ntBASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 RN7SL636P-201ENST00000497504 294 ntBASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 RNA5SP490-201ENST00000517141 136 ntBASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 AL359851.1-201ENST00000569460 4997 ntBASIC2.31□□□□□ -2.04
CCDC68Q9H2F9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC68Q9H2F9 ZNF702P-202ENST00000434269 1966 ntBASIC2.3□□□□□ -2.04
CCDC68Q9H2F9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC68Q9H2F9 SNORD113-7-201ENST00000363762 77 ntBASIC2.3□□□□□ -2.04
CCDC68Q9H2F9 Y_RNA.256-201ENST00000364594 104 ntBASIC2.3□□□□□ -2.04
CCDC68Q9H2F9 RNU4-12P-201ENST00000365233 139 ntBASIC2.3□□□□□ -2.04
CCDC68Q9H2F9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC68Q9H2F9 RNU6-933P-201ENST00000384424 107 ntBASIC2.3□□□□□ -2.04
CCDC68Q9H2F9 RNU6-332P-201ENST00000391193 108 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms