Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 SNORD13-201ENST00000459299 104 ntBASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 RNU6-1037P-201ENST00000459571 107 ntBASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 RNU6-1069P-201ENST00000516612 133 ntBASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 AC104576.1-201ENST00000524225 88 ntBASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 PSMA3P-201ENST00000555485 635 ntBASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 AC105245.1-201ENST00000581934 244 ntBASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 AC104458.1-201ENST00000608243 463 ntBASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 RMST_3.1-201ENST00000611651 109 ntBASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 MIR5739-201ENST00000619803 80 ntBASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.48□□□□□ -2.01
ZNF541Q9H0D2 RNU6-105P-201ENST00000363909 104 ntBASIC2.47□□□□□ -2.01
ZNF541Q9H0D2 RNU6-487P-201ENST00000365430 104 ntBASIC2.47□□□□□ -2.01
ZNF541Q9H0D2 RNA5SP118-201ENST00000410385 109 ntBASIC2.47□□□□□ -2.01
ZNF541Q9H0D2 BTF3P4-201ENST00000418852 495 ntBASIC2.47□□□□□ -2.01
ZNF541Q9H0D2 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.47□□□□□ -2.01
ZNF541Q9H0D2 MICF-203ENST00000432679 129 ntBASIC2.47□□□□□ -2.01
ZNF541Q9H0D2 NDUFA5P4-201ENST00000436704 385 ntBASIC2.47□□□□□ -2.01
ZNF541Q9H0D2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.47□□□□□ -2.01
ZNF541Q9H0D2 RNU2-53P-201ENST00000516257 147 ntBASIC2.47□□□□□ -2.01
ZNF541Q9H0D2 AC026371.1-201ENST00000551867 419 ntBASIC2.47□□□□□ -2.01
ZNF541Q9H0D2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.47□□□□□ -2.01
ZNF541Q9H0D2 AC090897.2-201ENST00000581715 130 ntBASIC2.47□□□□□ -2.01
ZNF541Q9H0D2 AL137847.3-201ENST00000611521 109 ntBASIC2.47□□□□□ -2.01
ZNF541Q9H0D2 Z82195.2-201ENST00000612348 18351 ntBASIC2.47□□□□□ -2.01
ZNF541Q9H0D2 Y_RNA.100-201ENST00000363141 102 ntBASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 RNU6-529P-201ENST00000363383 104 ntBASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 RNU6-336P-201ENST00000364891 107 ntBASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 Y_RNA.530-201ENST00000384587 101 ntBASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 MIR518E-201ENST00000385252 88 ntBASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 SNORA48.3-201ENST00000391081 134 ntBASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 AC019129.1-201ENST00000403786 261 ntBASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 RNA5SP270-201ENST00000411361 118 ntBASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 AC003989.2-201ENST00000440224 169 ntBASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 AL359672.1-201ENST00000442302 409 ntBASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 AC011753.1-201ENST00000451001 220 ntBASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 AP001025.1-201ENST00000486139 332 ntBASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 AC109329.1-201ENST00000518744 317 ntBASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 RPL30P11-203ENST00000598995 310 ntBASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 AC090517.3-201ENST00000625170 141 ntBASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.46□□□□□ -2.02
ZNF541Q9H0D2 RNU6-661P-201ENST00000362409 107 ntBASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 RNU6-1010P-201ENST00000362757 107 ntBASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 RNU6-622P-201ENST00000384272 103 ntBASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 MIR186-201ENST00000384988 86 ntBASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 RNU6-220P-201ENST00000390919 107 ntBASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 RNU2-63P-201ENST00000410792 194 ntBASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 RPL7P43-201ENST00000478876 753 ntBASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 AC018437.1-201ENST00000492214 406 ntBASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 AC005840.1-201ENST00000498412 377 ntBASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 Y_RNA.665-201ENST00000516177 98 ntBASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 RNU6-273P-201ENST00000516937 96 ntBASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 AC007375.1-201ENST00000554513 578 ntBASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 AC121333.1-201ENST00000567488 2709 ntBASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 MIR5571-201ENST00000577998 113 ntBASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 SNORA59B-202ENST00000578183 701 ntBASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
ZNF541Q9H0D2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 RNU6-655P-201ENST00000362858 107 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 RNY1P10-201ENST00000363268 113 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 Y_RNA.116-201ENST00000363292 103 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 RNU6-254P-201ENST00000363377 107 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 Y_RNA.157-201ENST00000363638 102 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 RNA5SP190-201ENST00000365222 118 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 RNU6-933P-201ENST00000384424 107 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 RNU6-1222P-201ENST00000384615 107 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 RNU2-23P-201ENST00000410545 195 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 EIF4EP4-201ENST00000424916 578 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 CR769767.1-201ENST00000436337 346 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 AC243964.1-201ENST00000441814 261 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 MTCO2P3-201ENST00000442543 421 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 CYP2C59P-201ENST00000457790 269 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 AC080013.2-201ENST00000460866 323 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 HMGN2P26-201ENST00000463169 339 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 AC090515.1-201ENST00000465295 476 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 RPL9P9-202ENST00000466501 579 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 MTCYBP18-201ENST00000501056 747 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 RNA5SP182-201ENST00000516064 82 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 AL355297.2-201ENST00000604792 129 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 AC009033.1-201ENST00000624279 431 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 FO624990.1-201ENST00000636373 85 ntBASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms