Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 SNORA44.1-201ENST00000517031 108 ntBASIC1.74□□□□□ -2.13
POLR1EQ9GZS1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.74□□□□□ -2.13
POLR1EQ9GZS1 AC104581.2-201ENST00000572227 430 ntBASIC1.74□□□□□ -2.13
POLR1EQ9GZS1 AC025754.2-201ENST00000606491 432 ntBASIC1.74□□□□□ -2.13
POLR1EQ9GZS1 AC090582.1-201ENST00000636321 199 ntBASIC1.74□□□□□ -2.13
POLR1EQ9GZS1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 RNU6-692P-201ENST00000384496 107 ntBASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 RNU6-293P-201ENST00000411259 106 ntBASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 AL360221.1-201ENST00000445989 335 ntBASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 MTND3P5-201ENST00000512798 333 ntBASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 AC022880.1-201ENST00000534017 973 ntBASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 HSBP1P1-201ENST00000555205 166 ntBASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 AP005136.1-201ENST00000579765 429 ntBASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 AC010620.1-201ENST00000601088 1102 ntBASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 AL034555.1-201ENST00000604816 211 ntBASIC1.73□□□□□ -2.13
POLR1EQ9GZS1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 CBX3P1-201ENST00000325243 554 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 RNU6-1285P-201ENST00000363480 105 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 RNU6-266P-201ENST00000364225 107 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 SNORD48-201ENST00000364953 64 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 RNU6-1103P-201ENST00000384150 107 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 RNY3P9-201ENST00000384727 106 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 DEFB108C-201ENST00000400154 252 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 AC009310.1-201ENST00000414414 451 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 CDK8P2-201ENST00000415020 547 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 AL035666.1-201ENST00000446195 348 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 AC013470.1-201ENST00000453438 462 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 SNRPFP3-201ENST00000457792 225 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 AC008834.1-201ENST00000511612 175 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 RNA5SP490-201ENST00000517141 136 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 AL137161.1-201ENST00000532231 390 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 HIF1AP1-201ENST00000553642 175 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 MIR4255-201ENST00000579351 72 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 AC073648.5-201ENST00000603502 305 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 AC103810.8-201ENST00000607347 118 ntBASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.72□□□□□ -2.13
POLR1EQ9GZS1 Y_RNA.399-201ENST00000383955 105 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 RNU6-517P-201ENST00000384362 110 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 Y_RNA.480-201ENST00000384364 102 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 RNU6-1158P-201ENST00000391167 107 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AL627390.1-201ENST00000396055 340 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AL117339.3-201ENST00000418733 162 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AC073464.1-201ENST00000429823 534 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AC073415.1-201ENST00000449240 153 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 RNU7-63P-201ENST00000459054 62 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 RNU7-180P-201ENST00000459240 63 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AC087884.1-201ENST00000469738 328 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AC132942.1-201ENST00000486753 483 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AC145146.1-201ENST00000496370 254 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AC022447.4-201ENST00000504053 364 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 RN7SKP298-201ENST00000515950 94 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 SNORA25.15-201ENST00000516487 89 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AC109479.2-201ENST00000517842 174 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 MIR3198-2-201ENST00000577868 80 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AC091805.2-201ENST00000603848 235 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AC107304.1-201ENST00000604229 296 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AC018889.1-201ENST00000605372 397 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 MIR502-201ENST00000606349 86 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 RN7SKP299-201ENST00000606679 301 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AC005609.4-201ENST00000625071 447 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 SNORD98-201ENST00000636377 67 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 AC241585.2-209ENST00000638217 143 ntBASIC1.71□□□□□ -2.14
POLR1EQ9GZS1 RNU4-56P-201ENST00000364700 142 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 RNU4-42P-201ENST00000364738 142 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 RNU6-996P-201ENST00000365438 107 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 RNU5A-6P-201ENST00000384136 116 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 SNORA48.1-201ENST00000390879 135 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 RPS20P15-201ENST00000412792 311 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 NCOR1P3-201ENST00000420479 303 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 AC002486.1-201ENST00000435098 391 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 AL031274.1-201ENST00000450334 232 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 RPS3AP17-201ENST00000472594 777 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 CCDC34P1-201ENST00000507441 517 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms