Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AL391261.3-201ENST00000557194 520 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 AL451007.1-201ENST00000595491 289 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 AC019176.2-201ENST00000611579 315 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 AP000553.6-201ENST00000641242 118 ntBASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXP3Q9BZS1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 AC093908.1-201ENST00000623125 8092 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.82-201ENST00000363000 102 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.92-201ENST00000363043 102 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 RNA5SP197-201ENST00000363357 119 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 RNU6-961P-201ENST00000363893 105 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.235-201ENST00000364412 102 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.306-201ENST00000365015 102 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.312-201ENST00000365089 102 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.322-201ENST00000365151 102 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.446-201ENST00000384178 104 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.506-201ENST00000384494 102 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 MIR487A-201ENST00000385009 80 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 MIR591-201ENST00000385290 95 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 RNU6-493P-201ENST00000391321 108 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 RNU6-1140P-201ENST00000410517 106 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 AC078809.1-201ENST00000427601 140 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 HMGN2P31-201ENST00000432430 273 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 MTCO1P5-201ENST00000433573 344 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 PRSS3P4-201ENST00000453323 162 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.650-201ENST00000459002 102 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 RNU6-861P-201ENST00000516745 106 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 SCARNA14-201ENST00000516903 136 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.777-201ENST00000516982 102 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 AC022695.1-201ENST00000522089 237 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 CKS1BP7-201ENST00000522230 235 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 MIR3690-201ENST00000580266 75 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.771-201ENST00000598668 102 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 AL161756.2-201ENST00000604597 246 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 AC072026.1-201ENST00000605023 201 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.789-201ENST00000622480 102 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 AC090740.1-201ENST00000623193 2262 ntBASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.75□□□□□ -1.81
FOXP3Q9BZS1 AC073073.2-201ENST00000609827 2578 ntBASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.136-201ENST00000363444 102 ntBASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 RNU6-1020P-201ENST00000363684 107 ntBASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 U3.39-201ENST00000408569 239 ntBASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 Y_RNA.590-201ENST00000410140 107 ntBASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 RNU6-651P-201ENST00000411040 105 ntBASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 RNU2-61P-201ENST00000411069 191 ntBASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 RPL23AP83-201ENST00000434984 473 ntBASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 AC110768.1-201ENST00000509222 400 ntBASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 SNORA40.9-201ENST00000515895 93 ntBASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 RNU2-27P-201ENST00000516185 142 ntBASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 AC008749.1-201ENST00000597650 306 ntBASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 AC068647.1-201ENST00000489539 2265 ntBASIC3.74□□□□□ -1.81
FOXP3Q9BZS1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 AC092268.1-201ENST00000342691 405 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 MIR410-201ENST00000362222 80 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 RNU6-858P-201ENST00000362436 107 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 RNU6-1159P-201ENST00000362933 107 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 RNU6-1175P-201ENST00000365200 107 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 RNU6-1280P-201ENST00000365211 107 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 RNU6-47P-201ENST00000383866 107 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 RNU6-514P-201ENST00000384208 107 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 SNORA36A-201ENST00000384221 132 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 RNU6-1035P-201ENST00000384477 107 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 MTCO2P33-201ENST00000402100 465 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 RNA5SP129-201ENST00000410276 118 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 AL035423.1-201ENST00000420331 213 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 AL139247.1-201ENST00000422768 325 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 AL591419.1-201ENST00000427423 339 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 HMGN2P10-201ENST00000448085 265 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 SNRPGP7-201ENST00000469016 106 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 AP001025.1-201ENST00000486139 332 ntBASIC3.73□□□□□ -1.81
FOXP3Q9BZS1 AC091959.1-201ENST00000495857 238 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms