Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MIR936-201ENST00000401264 98 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 AC004941.2-201ENST00000427009 228 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 AC103851.1-201ENST00000506833 274 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 RNU6-1003P-201ENST00000517099 105 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 CYP3A52P-201ENST00000563326 91 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 HMGB1P33-201ENST00000563485 527 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 MIR4714-201ENST00000580728 77 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 AC108706.1-201ENST00000611053 297 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 RMST_4.1-201ENST00000616886 107 ntBASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
UPF3BQ9BZI7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 RNU6-1285P-201ENST00000363480 105 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 SNORD116-12-201ENST00000384468 92 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 AL136310.1-201ENST00000404926 654 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 RNA5SP127-201ENST00000411051 133 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 MTATP6P20-201ENST00000414147 562 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 AC013410.2-201ENST00000422627 201 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 AL353777.1-201ENST00000425552 326 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 MTCYBP39-201ENST00000437562 491 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 AL358794.1-201ENST00000445689 381 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 MTCO3P9-201ENST00000506989 781 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 RNU6-351P-201ENST00000516097 100 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 RNA5SP121-201ENST00000516537 101 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 AL512310.8-201ENST00000550183 120 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 AC133485.1-201ENST00000567176 124 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 AC138907.6-201ENST00000568401 126 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 AC013244.2-201ENST00000603396 103 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 AC112187.2-201ENST00000604345 283 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 AC027335.2-201ENST00000624030 375 ntBASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.96□□□□□ -2.26
UPF3BQ9BZI7 Y_RNA.46-201ENST00000362695 102 ntBASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 RNU6-142P-201ENST00000384019 107 ntBASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 RNU6-1235P-201ENST00000384559 107 ntBASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 RPL22P18-201ENST00000417197 377 ntBASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 SNX2P2-201ENST00000424553 323 ntBASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 AC245047.4-201ENST00000433189 144 ntBASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 AC069257.2-201ENST00000441819 155 ntBASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 MTND5P2-201ENST00000442927 1142 ntBASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 AL122001.1-201ENST00000457027 370 ntBASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 RNU6-498P-201ENST00000459468 107 ntBASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 AC114982.1-201ENST00000469402 321 ntBASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 CENPUP1-201ENST00000526649 1202 ntBASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 MIR3136-201ENST00000583498 78 ntBASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 PART1_2.1-201ENST00000612397 250 ntBASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 OR4G3P-201ENST00000633500 913 ntBASIC0.95□□□□□ -2.26
UPF3BQ9BZI7 AC073343.1-201ENST00000328239 651 ntBASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 RNU4-15P-201ENST00000362613 141 ntBASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 MIR548B-201ENST00000385247 97 ntBASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 AC019070.1-201ENST00000415008 1024 ntBASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 PRPS1P1-201ENST00000445305 876 ntBASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 AL163195.1-201ENST00000496941 348 ntBASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 RNU5A-4P-201ENST00000516588 111 ntBASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 RNA5SP437-201ENST00000517249 129 ntBASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 AP003072.2-201ENST00000527756 676 ntBASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 MIR8087-201ENST00000612745 78 ntBASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 AL356596.1-201ENST00000624230 379 ntBASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 AC009033.1-201ENST00000624279 431 ntBASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 AC004808.1-201ENST00000627671 721 ntBASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 AC103706.2-201ENST00000638080 240 ntBASIC0.94□□□□□ -2.26
UPF3BQ9BZI7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 AC245060.5-201ENST00000610778 3293 ntBASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 RNU6-433P-201ENST00000363216 104 ntBASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 RNU2-7P-201ENST00000410794 178 ntBASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 MTND1P12-201ENST00000455231 147 ntBASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 AC013828.2-201ENST00000532487 235 ntBASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 MIR5697-201ENST00000578045 78 ntBASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 MZT1P2-201ENST00000604387 248 ntBASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 AC090578.1-201ENST00000604955 591 ntBASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 AC004492.1-201ENST00000607036 742 ntBASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 RNU6-87P-201ENST00000607561 108 ntBASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
UPF3BQ9BZI7 SNORA4.1-201ENST00000364263 144 ntBASIC0.92□□□□□ -2.26
UPF3BQ9BZI7 SNORA25-201ENST00000384384 134 ntBASIC0.92□□□□□ -2.26
UPF3BQ9BZI7 AC069282.1-201ENST00000411911 526 ntBASIC0.92□□□□□ -2.26
UPF3BQ9BZI7 MTCO3P41-201ENST00000414801 328 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms