Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 AP000705.1-201ENST00000454567 350 ntBASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 AC026726.1-201ENST00000512859 601 ntBASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 AC018448.1-201ENST00000552843 316 ntBASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 AC105137.2-201ENST00000569073 466 ntBASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 MIR92B-201ENST00000607575 96 ntBASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM56Q9BRZ2 AL136164.4-201ENST00000625013 2135 ntBASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 AC099654.7-201ENST00000635788 2127 ntBASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 RNA5SP130-201ENST00000364431 114 ntBASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 RNU6-81P-201ENST00000365608 104 ntBASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 RNU6-793P-201ENST00000384233 104 ntBASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 RNU6-198P-201ENST00000384258 104 ntBASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 RNU6-1135P-201ENST00000411083 103 ntBASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 AC007215.1-201ENST00000464893 276 ntBASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 RPL21P129-201ENST00000491732 478 ntBASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 AL591424.2-201ENST00000617023 128 ntBASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM56Q9BRZ2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM56Q9BRZ2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM56Q9BRZ2 RNU4-80P-201ENST00000363200 141 ntBASIC4□□□□□ -1.77
TRIM56Q9BRZ2 AL357139.1-201ENST00000407792 426 ntBASIC4□□□□□ -1.77
TRIM56Q9BRZ2 MIR1251-201ENST00000408552 70 ntBASIC4□□□□□ -1.77
TRIM56Q9BRZ2 BMS1P22-201ENST00000414726 313 ntBASIC4□□□□□ -1.77
TRIM56Q9BRZ2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4□□□□□ -1.77
TRIM56Q9BRZ2 AC019205.3-201ENST00000424573 156 ntBASIC4□□□□□ -1.77
TRIM56Q9BRZ2 RAB28P5-201ENST00000427490 651 ntBASIC4□□□□□ -1.77
TRIM56Q9BRZ2 AC009237.7-201ENST00000447357 229 ntBASIC4□□□□□ -1.77
TRIM56Q9BRZ2 AC010099.1-201ENST00000455434 375 ntBASIC4□□□□□ -1.77
TRIM56Q9BRZ2 AL121594.1-201ENST00000475906 575 ntBASIC4□□□□□ -1.77
TRIM56Q9BRZ2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4□□□□□ -1.77
TRIM56Q9BRZ2 AP000867.2-201ENST00000532468 320 ntBASIC4□□□□□ -1.77
TRIM56Q9BRZ2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4□□□□□ -1.77
TRIM56Q9BRZ2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4□□□□□ -1.77
TRIM56Q9BRZ2 AC034105.4-201ENST00000568304 277 ntBASIC4□□□□□ -1.77
TRIM56Q9BRZ2 AC091152.3-201ENST00000604227 325 ntBASIC4□□□□□ -1.77
TRIM56Q9BRZ2 AL365265.1-201ENST00000621045 234 ntBASIC4□□□□□ -1.77
TRIM56Q9BRZ2 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4□□□□□ -1.77
TRIM56Q9BRZ2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM56Q9BRZ2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4□□□□□ -1.77
TRIM56Q9BRZ2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM56Q9BRZ2 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 RNU6-211P-201ENST00000384047 107 ntBASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 AL512633.1-201ENST00000399931 655 ntBASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 U3.39-201ENST00000408569 239 ntBASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 AC023141.4-201ENST00000412031 328 ntBASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 SNORA84-201ENST00000459229 133 ntBASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 RPL30P12-201ENST00000474666 353 ntBASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 PPIAP15-201ENST00000479662 484 ntBASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 RN7SL271P-201ENST00000487601 295 ntBASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 AC140059.1-201ENST00000489238 361 ntBASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 RNU6-191P-201ENST00000516295 94 ntBASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 CYP4A27P-201ENST00000567218 190 ntBASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 AC005520.5-201ENST00000613926 164 ntBASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 AC034229.5-201ENST00000624258 185 ntBASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM56Q9BRZ2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 AC106871.1-201ENST00000568324 3102 ntBASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 SNORA60-201ENST00000362396 134 ntBASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 RNA5SP295-201ENST00000362655 121 ntBASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 RNU6-1010P-201ENST00000362757 107 ntBASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 EI24P2-201ENST00000397776 1076 ntBASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 AP000567.1-201ENST00000406413 156 ntBASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 AC083863.1-201ENST00000438811 231 ntBASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 RNU6-155P-201ENST00000516347 100 ntBASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 AC055872.1-201ENST00000570978 278 ntBASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 AC006111.3-201ENST00000622137 383 ntBASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM56Q9BRZ2 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms