Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RPS26P21-201ENST00000475397 348 ntBASIC3.11□□□□□ -1.91
SMOQ99835 AF186996.7-201ENST00000492781 209 ntBASIC3.11□□□□□ -1.91
SMOQ99835 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.11□□□□□ -1.91
SMOQ99835 RNU7-175P-201ENST00000515915 61 ntBASIC3.11□□□□□ -1.91
SMOQ99835 SNORD19.2-201ENST00000516978 73 ntBASIC3.11□□□□□ -1.91
SMOQ99835 EIF4BP1-201ENST00000554881 351 ntBASIC3.11□□□□□ -1.91
SMOQ99835 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.11□□□□□ -1.91
SMOQ99835 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.11□□□□□ -1.91
SMOQ99835 RPL23AP78-201ENST00000599928 470 ntBASIC3.11□□□□□ -1.91
SMOQ99835 Z98751.3-201ENST00000604447 521 ntBASIC3.11□□□□□ -1.91
SMOQ99835 AL033523.1-201ENST00000605153 153 ntBASIC3.11□□□□□ -1.91
SMOQ99835 RPL23AP88-201ENST00000605759 454 ntBASIC3.11□□□□□ -1.91
SMOQ99835 AC100812.1-201ENST00000607622 580 ntBASIC3.11□□□□□ -1.91
SMOQ99835 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.11□□□□□ -1.91
SMOQ99835 SCARNA4-201ENST00000629045 128 ntBASIC3.11□□□□□ -1.91
SMOQ99835 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMOQ99835 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SMOQ99835 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.11□□□□□ -1.91
SMOQ99835 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.11□□□□□ -1.91
SMOQ99835 AC010889.1-201ENST00000566193 2666 ntBASIC3.11□□□□□ -1.91
SMOQ99835 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMOQ99835 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMOQ99835 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMOQ99835 HAUS6P2-201ENST00000433254 2404 ntBASIC3.1□□□□□ -1.91
SMOQ99835 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMOQ99835 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMOQ99835 RNU6-487P-201ENST00000365430 104 ntBASIC3.1□□□□□ -1.91
SMOQ99835 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.1□□□□□ -1.91
SMOQ99835 RNU6-708P-201ENST00000384217 107 ntBASIC3.1□□□□□ -1.91
SMOQ99835 Y_RNA.504-201ENST00000384481 104 ntBASIC3.1□□□□□ -1.91
SMOQ99835 RNU6-19P-201ENST00000384718 107 ntBASIC3.1□□□□□ -1.91
SMOQ99835 AL365496.1-201ENST00000426885 215 ntBASIC3.1□□□□□ -1.91
SMOQ99835 AC022018.1-201ENST00000430685 241 ntBASIC3.1□□□□□ -1.91
SMOQ99835 AC004383.1-201ENST00000438135 289 ntBASIC3.1□□□□□ -1.91
SMOQ99835 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.1□□□□□ -1.91
SMOQ99835 IPO7P1-201ENST00000442031 636 ntBASIC3.1□□□□□ -1.91
SMOQ99835 AC009296.1-201ENST00000443146 155 ntBASIC3.1□□□□□ -1.91
SMOQ99835 AL353705.4-201ENST00000449661 238 ntBASIC3.1□□□□□ -1.91
SMOQ99835 AC012308.1-201ENST00000451232 178 ntBASIC3.1□□□□□ -1.91
SMOQ99835 RN7SL633P-201ENST00000488974 297 ntBASIC3.1□□□□□ -1.91
SMOQ99835 AC104564.1-201ENST00000493028 407 ntBASIC3.1□□□□□ -1.91
SMOQ99835 MRPS35P2-201ENST00000508242 191 ntBASIC3.1□□□□□ -1.91
SMOQ99835 RNU6-635P-201ENST00000516651 102 ntBASIC3.1□□□□□ -1.91
SMOQ99835 Y_RNA.706-201ENST00000516933 99 ntBASIC3.1□□□□□ -1.91
SMOQ99835 Y_RNA.715-201ENST00000517082 110 ntBASIC3.1□□□□□ -1.91
SMOQ99835 SNORA31.21-201ENST00000517180 77 ntBASIC3.1□□□□□ -1.91
SMOQ99835 AC131281.1-201ENST00000522984 164 ntBASIC3.1□□□□□ -1.91
SMOQ99835 HSPE1P4-201ENST00000550617 308 ntBASIC3.1□□□□□ -1.91
SMOQ99835 7SK.7-201ENST00000603504 247 ntBASIC3.1□□□□□ -1.91
SMOQ99835 AL356157.2-201ENST00000605122 111 ntBASIC3.1□□□□□ -1.91
SMOQ99835 MIR7153-201ENST00000637758 57 ntBASIC3.1□□□□□ -1.91
SMOQ99835 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMOQ99835 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.1□□□□□ -1.91
SMOQ99835 GABRG2-229ENST00000641017 3628 ntBASIC3.1□□□□□ -1.91
SMOQ99835 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.09□□□□□ -1.91
SMOQ99835 AP000560.1-201ENST00000624150 1937 ntBASIC3.09□□□□□ -1.91
SMOQ99835 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SMOQ99835 FAM35CP-201ENST00000554755 2470 ntBASIC3.09□□□□□ -1.91
SMOQ99835 MIR148B-201ENST00000362252 99 ntBASIC3.09□□□□□ -1.91
SMOQ99835 Y_RNA.149-201ENST00000363558 117 ntBASIC3.09□□□□□ -1.91
SMOQ99835 RNU6-1141P-201ENST00000364520 107 ntBASIC3.09□□□□□ -1.91
SMOQ99835 Y_RNA.358-201ENST00000365491 99 ntBASIC3.09□□□□□ -1.91
SMOQ99835 Y_RNA.380-201ENST00000365663 111 ntBASIC3.09□□□□□ -1.91
SMOQ99835 SET-203ENST00000372688 801 ntTSL 2 BASIC3.09□□□□□ -1.91
SMOQ99835 SNORA36A-201ENST00000384221 132 ntBASIC3.09□□□□□ -1.91
SMOQ99835 RNU6-750P-201ENST00000390946 107 ntBASIC3.09□□□□□ -1.91
SMOQ99835 MIR1252-201ENST00000408861 65 ntBASIC3.09□□□□□ -1.91
SMOQ99835 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SMOQ99835 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.09□□□□□ -1.91
SMOQ99835 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.09□□□□□ -1.91
SMOQ99835 MTCO3P8-201ENST00000453691 755 ntBASIC3.09□□□□□ -1.91
SMOQ99835 U8.22-201ENST00000459141 133 ntBASIC3.09□□□□□ -1.91
SMOQ99835 RNU7-87P-201ENST00000459343 62 ntBASIC3.09□□□□□ -1.91
SMOQ99835 AC093852.1-201ENST00000503587 266 ntBASIC3.09□□□□□ -1.91
SMOQ99835 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.09□□□□□ -1.91
SMOQ99835 SCGB1D5P-201ENST00000515134 247 ntBASIC3.09□□□□□ -1.91
SMOQ99835 RNU6-911P-201ENST00000516523 104 ntBASIC3.09□□□□□ -1.91
SMOQ99835 AC068657.1-201ENST00000520807 306 ntBASIC3.09□□□□□ -1.91
SMOQ99835 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.09□□□□□ -1.91
SMOQ99835 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.09□□□□□ -1.91
SMOQ99835 AL355297.3-201ENST00000604082 446 ntBASIC3.09□□□□□ -1.91
SMOQ99835 AL021879.1-201ENST00000611756 288 ntBASIC3.09□□□□□ -1.91
SMOQ99835 AL137790.1-201ENST00000634283 177 ntBASIC3.09□□□□□ -1.91
SMOQ99835 AL450472.1-202ENST00000637286 180 ntBASIC3.09□□□□□ -1.91
SMOQ99835 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SMOQ99835 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SMOQ99835 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.09□□□□□ -1.92
SMOQ99835 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.09□□□□□ -1.92
SMOQ99835 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.09□□□□□ -1.92
SMOQ99835 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.08□□□□□ -1.92
SMOQ99835 RNU6-238P-201ENST00000363313 106 ntBASIC3.08□□□□□ -1.92
SMOQ99835 Y_RNA.512-201ENST00000384518 102 ntBASIC3.08□□□□□ -1.92
SMOQ99835 RNU6-1222P-201ENST00000384615 107 ntBASIC3.08□□□□□ -1.92
SMOQ99835 Y_RNA.574-201ENST00000384766 95 ntBASIC3.08□□□□□ -1.92
SMOQ99835 MIR32-201ENST00000384965 70 ntBASIC3.08□□□□□ -1.92
SMOQ99835 MIR628-201ENST00000385229 95 ntBASIC3.08□□□□□ -1.92
SMOQ99835 RNA5SP390-201ENST00000410191 113 ntBASIC3.08□□□□□ -1.92
SMOQ99835 RPL39P29-201ENST00000447779 157 ntBASIC3.08□□□□□ -1.92
SMOQ99835 UQCRHP3-201ENST00000451503 251 ntBASIC3.08□□□□□ -1.92
SMOQ99835 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms