Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 AL354751.2-201ENST00000415471 210 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 RPL23AP95-201ENST00000426806 265 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 Y_RNA.639-201ENST00000458981 102 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 AC112771.1-201ENST00000463581 102 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 AC104564.1-201ENST00000493028 407 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 AC016632.1-201ENST00000503994 196 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 AC022493.2-201ENST00000506122 481 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 SEM1P1-201ENST00000506694 209 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 RNU6-470P-201ENST00000515954 104 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 AC115990.1-201ENST00000526957 301 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 MIR4506-201ENST00000584693 77 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 MIR4765-201ENST00000585007 77 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 7SK.7-201ENST00000603504 247 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 MTND5P30-201ENST00000452896 1731 ntBASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM43Q96BQ3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 Y_RNA.197-201ENST00000364004 102 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 RNU6-968P-201ENST00000384076 107 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 Y_RNA.504-201ENST00000384481 104 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 AC005534.2-201ENST00000431047 433 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 Z98742.2-201ENST00000431564 187 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 AL353997.1-201ENST00000432936 108 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 RPL23AP58-201ENST00000440453 469 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 HMGN1P18-201ENST00000457642 277 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 RN7SL442P-201ENST00000473804 320 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 AC068781.1-201ENST00000488231 618 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 AC022447.4-201ENST00000504053 364 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 AC091874.1-201ENST00000511402 339 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 RNU6-976P-201ENST00000516086 111 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 SCARNA17.1-201ENST00000516211 143 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 SNORA31.6-201ENST00000516241 130 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 SCARNA17.2-201ENST00000516334 143 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 SNORA31.26-201ENST00000517250 137 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 AC233981.2-201ENST00000611524 1614 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 SCARNA17.4-201ENST00000614296 143 ntBASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
TRIM43Q96BQ3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AC092268.1-201ENST00000342691 405 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 U3.13-201ENST00000364804 214 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 SNORD42.2-201ENST00000365570 69 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AP002088.1-201ENST00000382740 395 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 Y_RNA.445-201ENST00000384168 102 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 RN7SKP61-201ENST00000410642 295 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AC104332.2-201ENST00000429959 156 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AC244670.1-201ENST00000436879 112 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 GPM6BP3-201ENST00000442797 145 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AC009296.1-201ENST00000443146 155 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AC079354.2-201ENST00000453523 154 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 SCARNA11.3-201ENST00000517276 130 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AC109329.1-201ENST00000518744 317 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 MIR5696-201ENST00000578474 85 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AL158827.2-201ENST00000602494 330 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AC073410.2-201ENST00000603240 332 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AC005014.2-201ENST00000607795 599 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AC134503.1-201ENST00000633048 54 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AL691447.3-201ENST00000635020 330 ntBASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
TRIM43Q96BQ3 AC138915.1-201ENST00000565427 1685 ntBASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 RNU6-490P-201ENST00000362985 107 ntBASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 RNY1P16-201ENST00000363063 111 ntBASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 Y_RNA.128-201ENST00000363391 112 ntBASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 Y_RNA.138-201ENST00000363462 102 ntBASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 RNU6-1227P-201ENST00000383981 107 ntBASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 AL512633.1-201ENST00000399931 655 ntBASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 AL356057.3-201ENST00000402607 340 ntBASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 AC078809.1-201ENST00000427601 140 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms