Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 AC125238.1-201ENST00000448842 249 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 AL645939.1-201ENST00000453429 797 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFRSF25Q93038 snoU13.24-201ENST00000458998 104 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 AC091179.3-201ENST00000474761 144 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.26□□□□□ -1.73
TNFRSF25Q93038 CYCTP-201ENST00000504253 315 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 RN7SKP209-201ENST00000516888 304 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 TOMM20P2-201ENST00000540082 421 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 CR383656.8-201ENST00000549046 145 ntBASIC4.26□□□□□ -1.73
TNFRSF25Q93038 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.26□□□□□ -1.73
TNFRSF25Q93038 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFRSF25Q93038 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFRSF25Q93038 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFRSF25Q93038 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
TNFRSF25Q93038 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
TNFRSF25Q93038 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFRSF25Q93038 FAM35DP-201ENST00000323387 2712 ntBASIC4.25□□□□□ -1.73
TNFRSF25Q93038 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TNFRSF25Q93038 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFRSF25Q93038 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TNFRSF25Q93038 RNU1-100P-201ENST00000365255 165 ntBASIC4.25□□□□□ -1.73
TNFRSF25Q93038 AC006461.1-201ENST00000412637 326 ntBASIC4.25□□□□□ -1.73
TNFRSF25Q93038 RPS12P23-201ENST00000419579 400 ntBASIC4.25□□□□□ -1.73
TNFRSF25Q93038 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFRSF25Q93038 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TNFRSF25Q93038 RPL37P4-201ENST00000448908 268 ntBASIC4.25□□□□□ -1.73
TNFRSF25Q93038 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFRSF25Q93038 SNORA31.8-201ENST00000516327 108 ntBASIC4.25□□□□□ -1.73
TNFRSF25Q93038 AC008011.1-201ENST00000545989 227 ntBASIC4.25□□□□□ -1.73
TNFRSF25Q93038 AC244505.7-201ENST00000599675 272 ntBASIC4.25□□□□□ -1.73
TNFRSF25Q93038 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFRSF25Q93038 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
TNFRSF25Q93038 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFRSF25Q93038 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFRSF25Q93038 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFRSF25Q93038 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFRSF25Q93038 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFRSF25Q93038 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFRSF25Q93038 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFRSF25Q93038 AC010300.1-201ENST00000600671 5134 ntBASIC4.24□□□□□ -1.73
TNFRSF25Q93038 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TNFRSF25Q93038 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNFRSF25Q93038 SNORA8.3-201ENST00000384679 139 ntBASIC4.24□□□□□ -1.73
TNFRSF25Q93038 FTH1P15-201ENST00000406984 280 ntBASIC4.24□□□□□ -1.73
TNFRSF25Q93038 RPS26P42-201ENST00000413485 326 ntBASIC4.24□□□□□ -1.73
TNFRSF25Q93038 AC096649.2-201ENST00000416186 393 ntBASIC4.24□□□□□ -1.73
TNFRSF25Q93038 HMGN2P30-201ENST00000423237 256 ntBASIC4.24□□□□□ -1.73
TNFRSF25Q93038 AC012308.1-201ENST00000451232 178 ntBASIC4.24□□□□□ -1.73
TNFRSF25Q93038 HMGB1P22-201ENST00000505315 124 ntBASIC4.24□□□□□ -1.73
TNFRSF25Q93038 RNU6-1007P-201ENST00000516586 107 ntBASIC4.24□□□□□ -1.73
TNFRSF25Q93038 RNA5SP170-201ENST00000517150 101 ntBASIC4.24□□□□□ -1.73
TNFRSF25Q93038 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TNFRSF25Q93038 AC109810.1-201ENST00000534066 224 ntBASIC4.24□□□□□ -1.73
TNFRSF25Q93038 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFRSF25Q93038 AC013791.1-201ENST00000616619 62 ntBASIC4.24□□□□□ -1.73
TNFRSF25Q93038 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.24□□□□□ -1.73
TNFRSF25Q93038 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.24□□□□□ -1.73
TNFRSF25Q93038 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNFRSF25Q93038 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
TNFRSF25Q93038 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TNFRSF25Q93038 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
TNFRSF25Q93038 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TNFRSF25Q93038 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
TNFRSF25Q93038 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TNFRSF25Q93038 RNU6-1064P-201ENST00000410626 104 ntBASIC4.23□□□□□ -1.73
TNFRSF25Q93038 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.23□□□□□ -1.73
TNFRSF25Q93038 RPL26P27-201ENST00000414397 437 ntBASIC4.23□□□□□ -1.73
TNFRSF25Q93038 AC092047.1-201ENST00000424997 240 ntBASIC4.23□□□□□ -1.73
TNFRSF25Q93038 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.23□□□□□ -1.73
TNFRSF25Q93038 RNU6-436P-201ENST00000516171 114 ntBASIC4.23□□□□□ -1.73
TNFRSF25Q93038 RNU6-659P-201ENST00000516454 104 ntBASIC4.23□□□□□ -1.73
TNFRSF25Q93038 AC106785.1-201ENST00000565935 262 ntBASIC4.23□□□□□ -1.73
TNFRSF25Q93038 FTX_3.1-201ENST00000610451 147 ntBASIC4.23□□□□□ -1.73
TNFRSF25Q93038 AL078604.3-201ENST00000615580 211 ntBASIC4.23□□□□□ -1.73
TNFRSF25Q93038 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TNFRSF25Q93038 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
TNFRSF25Q93038 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.22□□□□□ -1.73
TNFRSF25Q93038 RNU6-1255P-201ENST00000363434 112 ntBASIC4.22□□□□□ -1.73
TNFRSF25Q93038 RNU6-801P-201ENST00000364087 105 ntBASIC4.22□□□□□ -1.73
TNFRSF25Q93038 RNU1-73P-201ENST00000383971 164 ntBASIC4.22□□□□□ -1.73
TNFRSF25Q93038 RNU6-245P-201ENST00000384020 107 ntBASIC4.22□□□□□ -1.73
TNFRSF25Q93038 MIR626-201ENST00000385032 94 ntBASIC4.22□□□□□ -1.73
TNFRSF25Q93038 MIR888-201ENST00000401186 77 ntBASIC4.22□□□□□ -1.73
TNFRSF25Q93038 U3.40-201ENST00000408706 208 ntBASIC4.22□□□□□ -1.73
TNFRSF25Q93038 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.22□□□□□ -1.73
TNFRSF25Q93038 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.22□□□□□ -1.73
TNFRSF25Q93038 RPS4XP13-201ENST00000483219 789 ntBASIC4.22□□□□□ -1.73
TNFRSF25Q93038 SNORA72.7-201ENST00000516349 94 ntBASIC4.22□□□□□ -1.73
TNFRSF25Q93038 MIR6134-201ENST00000617606 109 ntBASIC4.22□□□□□ -1.73
TNFRSF25Q93038 U2.21-201ENST00000637295 81 ntBASIC4.22□□□□□ -1.73
TNFRSF25Q93038 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TNFRSF25Q93038 AC106871.1-201ENST00000568324 3102 ntBASIC4.22□□□□□ -1.73
TNFRSF25Q93038 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TNFRSF25Q93038 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TNFRSF25Q93038 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
TNFRSF25Q93038 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
TNFRSF25Q93038 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.73
TNFRSF25Q93038 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms