Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 Y_RNA.533-201ENST00000384596 114 ntBASIC2.58□□□□□ -2
CNOT9Q92600 RPL19P1-201ENST00000411635 428 ntBASIC2.58□□□□□ -2
CNOT9Q92600 EEF1A1P41-201ENST00000414667 207 ntBASIC2.58□□□□□ -2
CNOT9Q92600 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.58□□□□□ -2
CNOT9Q92600 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.58□□□□□ -2
CNOT9Q92600 RNA5SP384-201ENST00000516615 116 ntBASIC2.58□□□□□ -2
CNOT9Q92600 SCARNA13-201ENST00000516672 275 ntBASIC2.58□□□□□ -2
CNOT9Q92600 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.58□□□□□ -2
CNOT9Q92600 HSPE1P20-201ENST00000538133 289 ntBASIC2.58□□□□□ -2
CNOT9Q92600 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.58□□□□□ -2
CNOT9Q92600 AL158827.2-201ENST00000602494 330 ntBASIC2.58□□□□□ -2
CNOT9Q92600 MIR5739-201ENST00000619803 80 ntBASIC2.58□□□□□ -2
CNOT9Q92600 AC090517.3-201ENST00000625170 141 ntBASIC2.58□□□□□ -2
CNOT9Q92600 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.58□□□□□ -2
CNOT9Q92600 AL691447.3-201ENST00000635020 330 ntBASIC2.58□□□□□ -2
CNOT9Q92600 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CNOT9Q92600 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.57□□□□□ -2
CNOT9Q92600 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.57□□□□□ -2
CNOT9Q92600 Y_RNA.48-201ENST00000362710 103 ntBASIC2.57□□□□□ -2
CNOT9Q92600 SNORA48.5-201ENST00000391143 135 ntBASIC2.57□□□□□ -2
CNOT9Q92600 RNU2-25P-201ENST00000411041 191 ntBASIC2.57□□□□□ -2
CNOT9Q92600 AC003685.2-201ENST00000422795 395 ntBASIC2.57□□□□□ -2
CNOT9Q92600 USMG5P1-201ENST00000425964 177 ntBASIC2.57□□□□□ -2
CNOT9Q92600 AL139132.1-201ENST00000431587 344 ntBASIC2.57□□□□□ -2
CNOT9Q92600 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.57□□□□□ -2
CNOT9Q92600 AC104389.3-201ENST00000445629 235 ntBASIC2.57□□□□□ -2
CNOT9Q92600 AL353705.4-201ENST00000449661 238 ntBASIC2.57□□□□□ -2
CNOT9Q92600 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.57□□□□□ -2
CNOT9Q92600 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.57□□□□□ -2
CNOT9Q92600 AF186996.7-201ENST00000492781 209 ntBASIC2.57□□□□□ -2
CNOT9Q92600 RNU6-567P-201ENST00000516746 107 ntBASIC2.57□□□□□ -2
CNOT9Q92600 CBX3P8-201ENST00000532412 525 ntBASIC2.57□□□□□ -2
CNOT9Q92600 ELOCP31-201ENST00000540463 467 ntBASIC2.57□□□□□ -2
CNOT9Q92600 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.57□□□□□ -2
CNOT9Q92600 MIR4325-201ENST00000583049 90 ntBASIC2.57□□□□□ -2
CNOT9Q92600 ZNF861P-201ENST00000588126 639 ntBASIC2.57□□□□□ -2
CNOT9Q92600 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.57□□□□□ -2
CNOT9Q92600 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.57□□□□□ -2
CNOT9Q92600 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.57□□□□□ -2
CNOT9Q92600 AL138963.2-201ENST00000605137 226 ntBASIC2.57□□□□□ -2
CNOT9Q92600 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.57□□□□□ -2
CNOT9Q92600 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CNOT9Q92600 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.57□□□□□ -2
CNOT9Q92600 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CNOT9Q92600 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.56□□□□□ -2
CNOT9Q92600 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
CNOT9Q92600 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
CNOT9Q92600 RNU4-79P-201ENST00000362764 141 ntBASIC2.56□□□□□ -2
CNOT9Q92600 Y_RNA.259-201ENST00000364619 101 ntBASIC2.56□□□□□ -2
CNOT9Q92600 SNORA18.3-201ENST00000384122 132 ntBASIC2.56□□□□□ -2
CNOT9Q92600 Y_RNA.509-201ENST00000384506 99 ntBASIC2.56□□□□□ -2
CNOT9Q92600 RNU6-310P-201ENST00000384655 107 ntBASIC2.56□□□□□ -2
CNOT9Q92600 RNU6-331P-201ENST00000384724 107 ntBASIC2.56□□□□□ -2
CNOT9Q92600 MIR29B2-201ENST00000385055 81 ntBASIC2.56□□□□□ -2
CNOT9Q92600 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.56□□□□□ -2
CNOT9Q92600 RNY4P36-201ENST00000391116 96 ntBASIC2.56□□□□□ -2
CNOT9Q92600 MTCYBP4-201ENST00000401524 249 ntBASIC2.56□□□□□ -2
CNOT9Q92600 Y_RNA.646-201ENST00000410980 101 ntBASIC2.56□□□□□ -2
CNOT9Q92600 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.56□□□□□ -2
CNOT9Q92600 AC012306.1-201ENST00000423267 114 ntBASIC2.56□□□□□ -2
CNOT9Q92600 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.56□□□□□ -2
CNOT9Q92600 Y_RNA.653-201ENST00000459091 95 ntBASIC2.56□□□□□ -2
CNOT9Q92600 SNORD19B-201ENST00000459623 84 ntBASIC2.56□□□□□ -2
CNOT9Q92600 S100A11P2-201ENST00000467589 312 ntBASIC2.56□□□□□ -2
CNOT9Q92600 RPL23AP75-201ENST00000491601 451 ntBASIC2.56□□□□□ -2
CNOT9Q92600 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.56□□□□□ -2
CNOT9Q92600 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.56□□□□□ -2
CNOT9Q92600 SNORA9.3-201ENST00000516383 129 ntBASIC2.56□□□□□ -2
CNOT9Q92600 Y_RNA.718-201ENST00000517110 102 ntBASIC2.56□□□□□ -2
CNOT9Q92600 RNU6-586P-201ENST00000517265 104 ntBASIC2.56□□□□□ -2
CNOT9Q92600 AC023824.2-201ENST00000566185 400 ntBASIC2.56□□□□□ -2
CNOT9Q92600 MIR3923-201ENST00000579521 83 ntBASIC2.56□□□□□ -2
CNOT9Q92600 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.56□□□□□ -2
CNOT9Q92600 RPL23AP88-201ENST00000605759 454 ntBASIC2.56□□□□□ -2
CNOT9Q92600 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.56□□□□□ -2
CNOT9Q92600 ZNF299P-201ENST00000406845 1804 ntBASIC2.56□□□□□ -2
CNOT9Q92600 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
CNOT9Q92600 AC069528.2-201ENST00000624849 1991 ntBASIC2.56□□□□□ -2
CNOT9Q92600 Y_RNA.61-201ENST00000362835 102 ntBASIC2.55□□□□□ -2
CNOT9Q92600 RNU6-797P-201ENST00000363101 109 ntBASIC2.55□□□□□ -2
CNOT9Q92600 RNA5SP387-201ENST00000364226 106 ntBASIC2.55□□□□□ -2
CNOT9Q92600 RNA5SP125-201ENST00000364843 120 ntBASIC2.55□□□□□ -2
CNOT9Q92600 SNORA70.4-201ENST00000365509 134 ntBASIC2.55□□□□□ -2
CNOT9Q92600 RNU6-1274P-201ENST00000384557 107 ntBASIC2.55□□□□□ -2
CNOT9Q92600 SNORA44-201ENST00000384584 132 ntBASIC2.55□□□□□ -2
CNOT9Q92600 UBA52P6-201ENST00000399822 382 ntBASIC2.55□□□□□ -2
CNOT9Q92600 RNA5SP494-201ENST00000410653 129 ntBASIC2.55□□□□□ -2
CNOT9Q92600 HMGB3P2-201ENST00000411913 584 ntBASIC2.55□□□□□ -2
CNOT9Q92600 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.55□□□□□ -2
CNOT9Q92600 AC243428.1-201ENST00000421099 264 ntBASIC2.55□□□□□ -2
CNOT9Q92600 AL358453.1-201ENST00000422522 250 ntBASIC2.55□□□□□ -2
CNOT9Q92600 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.55□□□□□ -2
CNOT9Q92600 CYP2C59P-201ENST00000457790 269 ntBASIC2.55□□□□□ -2
CNOT9Q92600 snoU13.6-201ENST00000458785 104 ntBASIC2.55□□□□□ -2
CNOT9Q92600 RN7SL297P-201ENST00000483161 293 ntBASIC2.55□□□□□ -2
CNOT9Q92600 CKS1BP2-201ENST00000497342 240 ntBASIC2.55□□□□□ -2
CNOT9Q92600 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.55□□□□□ -2
CNOT9Q92600 AC097473.1-201ENST00000508142 408 ntBASIC2.55□□□□□ -2
CNOT9Q92600 SNORA74D-201ENST00000516404 141 ntBASIC2.55□□□□□ -2
CNOT9Q92600 SCARNA16.2-201ENST00000516520 172 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 531.2 ms