Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC067747.1-201ENST00000608026 250 ntBASIC1.82□□□□□ -2.12
LINC01006Q8NI28 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.82□□□□□ -2.12
LINC01006Q8NI28 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
LINC01006Q8NI28 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.82□□□□□ -2.12
LINC01006Q8NI28 AL161423.1-201ENST00000613700 262 ntBASIC1.82□□□□□ -2.12
LINC01006Q8NI28 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.82□□□□□ -2.12
LINC01006Q8NI28 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
LINC01006Q8NI28 AC112487.2-201ENST00000637950 304 ntBASIC1.82□□□□□ -2.12
LINC01006Q8NI28 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
LINC01006Q8NI28 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LINC01006Q8NI28 MTND5P30-201ENST00000452896 1731 ntBASIC1.82□□□□□ -2.12
LINC01006Q8NI28 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
LINC01006Q8NI28 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
LINC01006Q8NI28 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
LINC01006Q8NI28 AP006437.1-201ENST00000641440 3685 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 Y_RNA.40-201ENST00000362645 93 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 RNU6-1059P-201ENST00000363752 98 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 RNU6-487P-201ENST00000365430 104 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 Y_RNA.474-201ENST00000384341 102 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 Y_RNA.529-201ENST00000384586 119 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 MIR517A-201ENST00000385001 87 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.81□□□□□ -2.12
LINC01006Q8NI28 Z82205.1-201ENST00000428456 297 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 AL591806.2-201ENST00000433122 173 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 HMGN2P3-201ENST00000433603 273 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 HMGN2P5-201ENST00000436882 273 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 FABP5P14-201ENST00000437273 393 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.81□□□□□ -2.12
LINC01006Q8NI28 RNU6-1037P-201ENST00000459571 107 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 RPS29P27-201ENST00000463711 170 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 SNRPGP7-201ENST00000469016 106 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 MTCO1P29-201ENST00000496868 288 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 RPS27P27-201ENST00000498779 255 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.81□□□□□ -2.12
LINC01006Q8NI28 SMURF2P1-201ENST00000514992 481 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 RNU6-277P-201ENST00000516272 106 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 RNU5B-3P-201ENST00000516601 115 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 RNU6-612P-201ENST00000516909 102 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.81□□□□□ -2.12
LINC01006Q8NI28 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.81□□□□□ -2.12
LINC01006Q8NI28 AC010186.2-204ENST00000537668 439 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 AC093027.1-201ENST00000546698 429 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.81□□□□□ -2.12
LINC01006Q8NI28 CPDP1-201ENST00000579660 283 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 MIR4765-201ENST00000585007 77 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 POLR3GP2-201ENST00000588366 668 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 BNIP3P16-201ENST00000589779 534 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 AL356280.1-201ENST00000603614 379 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 AL132765.2-201ENST00000610812 351 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 MIR6128-201ENST00000615528 109 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 AC063943.3-201ENST00000615562 356 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 AL008636.1-201ENST00000625038 1018 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 MIR7157-201ENST00000635801 60 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LINC01006Q8NI28 AL359854.1-201ENST00000614203 1594 ntBASIC1.81□□□□□ -2.12
LINC01006Q8NI28 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LINC01006Q8NI28 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LINC01006Q8NI28 HAUS6P2-201ENST00000433254 2404 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AC080128.1-201ENST00000474389 1917 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AC135776.4-201ENST00000624300 1904 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LINC01006Q8NI28 Y_RNA.263-201ENST00000364659 114 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 Y_RNA.356-201ENST00000365475 113 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 MIR218-1-201ENST00000384999 110 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AL079342.1-201ENST00000401460 267 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 RN7SKP158-201ENST00000410453 326 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 RNU6-1304P-201ENST00000411374 106 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AC138623.1-201ENST00000418060 216 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AL139396.1-201ENST00000421137 167 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AL645568.3-201ENST00000433683 316 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AP000705.1-201ENST00000454567 350 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AL441985.1-201ENST00000457727 251 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 Y_RNA.638-201ENST00000459374 113 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 RPL36AP48-201ENST00000485521 314 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 RPPH1-2P-201ENST00000516688 293 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AC015712.3-201ENST00000559380 164 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AC105137.2-201ENST00000569073 466 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 RPS3AP23-202ENST00000574601 686 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 MIR3199-1-201ENST00000582434 88 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AP001836.1-201ENST00000604675 523 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AL133215.3-201ENST00000609801 448 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AC009233.1-201ENST00000616477 371 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 AC024581.2-201ENST00000619986 252 ntBASIC1.8□□□□□ -2.12
LINC01006Q8NI28 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.8□□□□□ -2.12
LINC01006Q8NI28 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
LINC01006Q8NI28 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.8□□□□□ -2.12
LINC01006Q8NI28 Z75746.1-201ENST00000440243 2080 ntBASIC1.79□□□□□ -2.12
LINC01006Q8NI28 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LINC01006Q8NI28 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms