Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NEDD1Q8NHV4 RPL21P17-201ENST00000397467 475 ntBASIC4.43□□□□□ -1.7
NEDD1Q8NHV4 AL714022.1-201ENST00000439897 151 ntBASIC4.43□□□□□ -1.7
NEDD1Q8NHV4 RPS4XP13-201ENST00000483219 789 ntBASIC4.43□□□□□ -1.7
NEDD1Q8NHV4 RNU6-436P-201ENST00000516171 114 ntBASIC4.43□□□□□ -1.7
NEDD1Q8NHV4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.43□□□□□ -1.7
NEDD1Q8NHV4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD1Q8NHV4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
NEDD1Q8NHV4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 LINC02471-203ENST00000641941 4752 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 SNORD74.4-201ENST00000364129 80 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 RNU6-1082P-201ENST00000364574 107 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 Y_RNA.393-201ENST00000383936 102 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 SNORA5A-201ENST00000384111 134 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 RNU6-49P-201ENST00000384256 107 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 RNU6-19P-201ENST00000384718 107 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 AC004552.1-201ENST00000419089 348 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 AL353748.1-201ENST00000440753 474 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 AC004386.2-201ENST00000441858 148 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 AL158147.1-201ENST00000443970 75 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 RPS26P3-201ENST00000470205 348 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 AC090543.2-201ENST00000483963 348 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 AC004057.1-201ENST00000485827 348 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 RNA5SP208-201ENST00000516156 78 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 AC136628.3-201ENST00000521868 290 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 AC244505.7-201ENST00000599675 272 ntBASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
NEDD1Q8NHV4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 Y_RNA.293-201ENST00000364908 93 ntBASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 MIR23B-201ENST00000384832 97 ntBASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 AL358075.3-201ENST00000426289 226 ntBASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 RPL23AP95-201ENST00000426806 265 ntBASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 AC007560.1-201ENST00000426912 237 ntBASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 snoU13.3-201ENST00000459441 104 ntBASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 VWA8P1-201ENST00000510889 176 ntBASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 RNU6-572P-201ENST00000516724 80 ntBASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 RNU2-60P-201ENST00000517290 128 ntBASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 AL391903.3-201ENST00000612158 163 ntBASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 AC106754.2-201ENST00000623006 233 ntBASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 MIR1245B-201ENST00000636115 69 ntBASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD1Q8NHV4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.4□□□□□ -1.7
NEDD1Q8NHV4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NEDD1Q8NHV4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
NEDD1Q8NHV4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NEDD1Q8NHV4 CENPCP1-201ENST00000533085 2578 ntBASIC4.4□□□□□ -1.7
NEDD1Q8NHV4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 RNA5SP173-201ENST00000364857 136 ntBASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 RNU6-969P-201ENST00000383900 105 ntBASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 RNU6-106P-201ENST00000384405 107 ntBASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 AL591034.1-201ENST00000407447 340 ntBASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 AL035423.1-201ENST00000420331 213 ntBASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 AL049874.1-201ENST00000489560 388 ntBASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 AC062037.1-201ENST00000605302 128 ntBASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 SNORA51-201ENST00000606420 132 ntBASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 AC004832.5-201ENST00000608677 401 ntBASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 AL391261.4-201ENST00000616012 481 ntBASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEDD1Q8NHV4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 AC010329.5-201ENST00000623497 2174 ntBASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 RNA5SP51-201ENST00000364750 119 ntBASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 Y_RNA.498-201ENST00000384460 102 ntBASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 MIR200C-201ENST00000384980 68 ntBASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 MIR548A3-201ENST00000385297 97 ntBASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 SNORA75.5-201ENST00000391291 81 ntBASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 RPL23AP48-201ENST00000406913 488 ntBASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 Z85995.1-201ENST00000415547 335 ntBASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 NDUFS5P3-201ENST00000450668 321 ntBASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms