Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 Y_RNA.552-201ENST00000384665 112 ntBASIC3.35□□□□□ -1.87
HIPK4Q8NE63 MIR329-1-201ENST00000385028 80 ntBASIC3.35□□□□□ -1.87
HIPK4Q8NE63 Y_RNA.581-201ENST00000391017 97 ntBASIC3.35□□□□□ -1.87
HIPK4Q8NE63 RNU1-101P-201ENST00000391171 127 ntBASIC3.35□□□□□ -1.87
HIPK4Q8NE63 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HIPK4Q8NE63 AL139247.1-201ENST00000422768 325 ntBASIC3.35□□□□□ -1.87
HIPK4Q8NE63 AL365496.1-201ENST00000426885 215 ntBASIC3.35□□□□□ -1.87
HIPK4Q8NE63 AL133162.1-201ENST00000463228 453 ntBASIC3.35□□□□□ -1.87
HIPK4Q8NE63 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.35□□□□□ -1.87
HIPK4Q8NE63 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.35□□□□□ -1.87
HIPK4Q8NE63 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.35□□□□□ -1.87
HIPK4Q8NE63 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.35□□□□□ -1.87
HIPK4Q8NE63 Y_RNA.673-201ENST00000516306 88 ntBASIC3.35□□□□□ -1.87
HIPK4Q8NE63 RN7SKP49-201ENST00000516675 260 ntBASIC3.35□□□□□ -1.87
HIPK4Q8NE63 SNORD59.2-201ENST00000516873 68 ntBASIC3.35□□□□□ -1.87
HIPK4Q8NE63 AC104027.1-201ENST00000521887 300 ntBASIC3.35□□□□□ -1.87
HIPK4Q8NE63 AC115990.1-201ENST00000526957 301 ntBASIC3.35□□□□□ -1.87
HIPK4Q8NE63 RPS15AP11-201ENST00000594193 385 ntBASIC3.35□□□□□ -1.87
HIPK4Q8NE63 VN1R85P-201ENST00000601587 426 ntBASIC3.35□□□□□ -1.87
HIPK4Q8NE63 RNU6-91P-201ENST00000607774 107 ntBASIC3.35□□□□□ -1.87
HIPK4Q8NE63 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.35□□□□□ -1.87
HIPK4Q8NE63 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.35□□□□□ -1.87
HIPK4Q8NE63 AC058791.1-201ENST00000608412 3198 ntBASIC3.35□□□□□ -1.87
HIPK4Q8NE63 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HIPK4Q8NE63 MIR335-201ENST00000362173 94 ntBASIC3.34□□□□□ -1.87
HIPK4Q8NE63 AC126124.2-201ENST00000413542 321 ntBASIC3.34□□□□□ -1.87
HIPK4Q8NE63 AC096649.2-201ENST00000416186 393 ntBASIC3.34□□□□□ -1.87
HIPK4Q8NE63 TRIAP1P1-201ENST00000427062 225 ntBASIC3.34□□□□□ -1.87
HIPK4Q8NE63 Z98949.2-201ENST00000440996 144 ntBASIC3.34□□□□□ -1.87
HIPK4Q8NE63 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.34□□□□□ -1.87
HIPK4Q8NE63 RPL26P26-201ENST00000480251 434 ntBASIC3.34□□□□□ -1.87
HIPK4Q8NE63 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.34□□□□□ -1.87
HIPK4Q8NE63 SNORA31.21-201ENST00000517180 77 ntBASIC3.34□□□□□ -1.87
HIPK4Q8NE63 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.34□□□□□ -1.87
HIPK4Q8NE63 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.34□□□□□ -1.87
HIPK4Q8NE63 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.34□□□□□ -1.87
HIPK4Q8NE63 AL391813.1-201ENST00000603098 260 ntBASIC3.34□□□□□ -1.87
HIPK4Q8NE63 AL138963.2-201ENST00000605137 226 ntBASIC3.34□□□□□ -1.87
HIPK4Q8NE63 SNORD98-201ENST00000636377 67 ntBASIC3.34□□□□□ -1.87
HIPK4Q8NE63 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.34□□□□□ -1.87
HIPK4Q8NE63 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HIPK4Q8NE63 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HIPK4Q8NE63 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HIPK4Q8NE63 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HIPK4Q8NE63 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.33□□□□□ -1.88
HIPK4Q8NE63 MIR148B-201ENST00000362252 99 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 Y_RNA.16-201ENST00000362421 102 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 Y_RNA.40-201ENST00000362645 93 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 RNU6-1159P-201ENST00000362933 107 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 SNORD81.1-201ENST00000363064 77 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 RNU6-529P-201ENST00000363383 104 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 SNORA20.1-201ENST00000364790 130 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 RNU6-102P-201ENST00000384485 104 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 Y_RNA.541-201ENST00000384640 113 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 MIR1193-201ENST00000408109 78 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 RNA5SP293-201ENST00000410527 113 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 GOT2P5-201ENST00000433995 546 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 AC005002.2-201ENST00000438228 269 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 CENPBD1P1-201ENST00000464061 469 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 RN7SL594P-201ENST00000470590 287 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.33□□□□□ -1.88
HIPK4Q8NE63 AIG1P1-201ENST00000503376 148 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 RNU5F-2P-201ENST00000516066 82 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 RN7SKP21-201ENST00000516503 220 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 AC107934.2-201ENST00000518653 310 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 AC068657.1-201ENST00000520807 306 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 MIR3160-1-201ENST00000577972 85 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 AC010900.2-201ENST00000604508 210 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 AC069200.1-201ENST00000609511 323 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 AC141273.2-201ENST00000618989 130 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 AP003355.3-201ENST00000623465 114 ntBASIC3.33□□□□□ -1.88
HIPK4Q8NE63 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HIPK4Q8NE63 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HIPK4Q8NE63 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
HIPK4Q8NE63 AC103988.1-201ENST00000566382 2177 ntBASIC3.32□□□□□ -1.88
HIPK4Q8NE63 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.32□□□□□ -1.88
HIPK4Q8NE63 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HIPK4Q8NE63 RNU6-1010P-201ENST00000362757 107 ntBASIC3.32□□□□□ -1.88
HIPK4Q8NE63 SNORD113-8-201ENST00000363497 74 ntBASIC3.32□□□□□ -1.88
HIPK4Q8NE63 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HIPK4Q8NE63 RNU6-1145P-201ENST00000384246 107 ntBASIC3.32□□□□□ -1.88
HIPK4Q8NE63 SNORD63-201ENST00000384262 68 ntBASIC3.32□□□□□ -1.88
HIPK4Q8NE63 Y_RNA.478-201ENST00000384358 107 ntBASIC3.32□□□□□ -1.88
HIPK4Q8NE63 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.32□□□□□ -1.88
HIPK4Q8NE63 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.32□□□□□ -1.88
HIPK4Q8NE63 RPS29P7-201ENST00000439662 171 ntBASIC3.32□□□□□ -1.88
HIPK4Q8NE63 AL031183.1-201ENST00000457667 207 ntBASIC3.32□□□□□ -1.88
HIPK4Q8NE63 RPS23P5-201ENST00000495419 428 ntBASIC3.32□□□□□ -1.88
HIPK4Q8NE63 PHBP14-201ENST00000512887 367 ntBASIC3.32□□□□□ -1.88
HIPK4Q8NE63 RNU6-496P-201ENST00000516145 99 ntBASIC3.32□□□□□ -1.88
HIPK4Q8NE63 RNU6-1338P-201ENST00000516328 91 ntBASIC3.32□□□□□ -1.88
HIPK4Q8NE63 RNU6-1198P-201ENST00000516904 67 ntBASIC3.32□□□□□ -1.88
HIPK4Q8NE63 DEFB108E-201ENST00000524692 240 ntBASIC3.32□□□□□ -1.88
HIPK4Q8NE63 AC025281.1-201ENST00000567026 265 ntBASIC3.32□□□□□ -1.88
HIPK4Q8NE63 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.32□□□□□ -1.88
HIPK4Q8NE63 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
HIPK4Q8NE63 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HIPK4Q8NE63 AL391987.6-201ENST00000305671 199 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 Y_RNA.20-201ENST00000362479 113 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 RNA5SP383-201ENST00000362934 120 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms