Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AL133216.2-202ENST00000634512 349 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
USP38Q8NB14 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
USP38Q8NB14 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.81□□□□□ -1.96
USP38Q8NB14 RNU6-1010P-201ENST00000362757 107 ntBASIC2.81□□□□□ -1.96
USP38Q8NB14 RNA5SP393-201ENST00000363423 117 ntBASIC2.81□□□□□ -1.96
USP38Q8NB14 Y_RNA.151-201ENST00000363566 112 ntBASIC2.81□□□□□ -1.96
USP38Q8NB14 MIR521-1-201ENST00000384902 87 ntBASIC2.81□□□□□ -1.96
USP38Q8NB14 Y_RNA.595-201ENST00000410403 105 ntBASIC2.81□□□□□ -1.96
USP38Q8NB14 AL030996.1-201ENST00000411430 235 ntBASIC2.81□□□□□ -1.96
USP38Q8NB14 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.81□□□□□ -1.96
USP38Q8NB14 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.81□□□□□ -1.96
USP38Q8NB14 AC098614.3-201ENST00000438957 440 ntBASIC2.81□□□□□ -1.96
USP38Q8NB14 AL445687.1-201ENST00000439946 251 ntBASIC2.81□□□□□ -1.96
USP38Q8NB14 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.81□□□□□ -1.96
USP38Q8NB14 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.81□□□□□ -1.96
USP38Q8NB14 MTCO1P29-201ENST00000496868 288 ntBASIC2.81□□□□□ -1.96
USP38Q8NB14 RNU7-30P-201ENST00000516835 62 ntBASIC2.81□□□□□ -1.96
USP38Q8NB14 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.81□□□□□ -1.96
USP38Q8NB14 MIR548S-201ENST00000581352 82 ntBASIC2.81□□□□□ -1.96
USP38Q8NB14 AC105245.1-201ENST00000581934 244 ntBASIC2.81□□□□□ -1.96
USP38Q8NB14 MIR4781-201ENST00000585250 76 ntBASIC2.81□□□□□ -1.96
USP38Q8NB14 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.81□□□□□ -1.96
USP38Q8NB14 AC002543.1-201ENST00000299783 1954 ntBASIC2.81□□□□□ -1.96
USP38Q8NB14 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
USP38Q8NB14 MAPK10-266ENST00000641066 6555 ntBASIC2.81□□□□□ -1.96
USP38Q8NB14 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.8□□□□□ -1.96
USP38Q8NB14 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
USP38Q8NB14 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
USP38Q8NB14 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
USP38Q8NB14 RNU6-845P-201ENST00000362578 103 ntBASIC2.8□□□□□ -1.96
USP38Q8NB14 Y_RNA.279-201ENST00000364763 95 ntBASIC2.8□□□□□ -1.96
USP38Q8NB14 DEFA7P-201ENST00000382676 285 ntBASIC2.8□□□□□ -1.96
USP38Q8NB14 RNU1-138P-201ENST00000384093 164 ntBASIC2.8□□□□□ -1.96
USP38Q8NB14 RNU6-1222P-201ENST00000384615 107 ntBASIC2.8□□□□□ -1.96
USP38Q8NB14 RNU6-95P-201ENST00000384697 107 ntBASIC2.8□□□□□ -1.96
USP38Q8NB14 MIR518C-201ENST00000384822 101 ntBASIC2.8□□□□□ -1.96
USP38Q8NB14 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
USP38Q8NB14 RNU2-23P-201ENST00000410545 195 ntBASIC2.8□□□□□ -1.96
USP38Q8NB14 SNAP23P1-201ENST00000433229 246 ntBASIC2.8□□□□□ -1.96
USP38Q8NB14 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.8□□□□□ -1.96
USP38Q8NB14 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.8□□□□□ -1.96
USP38Q8NB14 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.8□□□□□ -1.96
USP38Q8NB14 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.8□□□□□ -1.96
USP38Q8NB14 RNU2-53P-201ENST00000516257 147 ntBASIC2.8□□□□□ -1.96
USP38Q8NB14 RNU6-566P-201ENST00000516790 107 ntBASIC2.8□□□□□ -1.96
USP38Q8NB14 RNA5SP454-201ENST00000517231 127 ntBASIC2.8□□□□□ -1.96
USP38Q8NB14 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.8□□□□□ -1.96
USP38Q8NB14 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.8□□□□□ -1.96
USP38Q8NB14 MIR4446-201ENST00000578505 67 ntBASIC2.8□□□□□ -1.96
USP38Q8NB14 MIR5194-201ENST00000582634 120 ntBASIC2.8□□□□□ -1.96
USP38Q8NB14 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
USP38Q8NB14 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
USP38Q8NB14 SNORA72.1-201ENST00000363485 129 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 Y_RNA.301-201ENST00000364990 103 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 RNU6-306P-201ENST00000384617 107 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 RNA5SP210-201ENST00000391034 120 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 BTF3L4P2-201ENST00000392798 346 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 AL139396.1-201ENST00000421137 167 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 EIF4EP4-201ENST00000424916 578 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 MTCO3P46-201ENST00000425787 232 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.79□□□□□ -1.96
USP38Q8NB14 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.79□□□□□ -1.96
USP38Q8NB14 PCMTD1P1-201ENST00000455560 355 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 MTND1P11-201ENST00000456661 876 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 RPS27P27-201ENST00000498779 255 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 AC116337.1-201ENST00000509680 687 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 AC046134.1-201ENST00000514454 666 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 RNU6-1053P-201ENST00000515930 101 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 SNORA20.3-201ENST00000516880 132 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.79□□□□□ -1.96
USP38Q8NB14 HSPE1P4-201ENST00000550617 308 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 AC007375.1-201ENST00000554513 578 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 AL121579.1-201ENST00000555129 305 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.79□□□□□ -1.96
USP38Q8NB14 RPL30P11-203ENST00000598995 310 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 AP000942.3-201ENST00000603702 160 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 AP001836.1-201ENST00000604675 523 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 AL670379.2-201ENST00000604983 252 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 MIR3976-201ENST00000606807 139 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 AC104237.2-201ENST00000612456 443 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.79□□□□□ -1.96
USP38Q8NB14 AC010297.1-201ENST00000623948 149 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 AC090517.3-201ENST00000625170 141 ntBASIC2.79□□□□□ -1.96
USP38Q8NB14 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
USP38Q8NB14 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
USP38Q8NB14 RNU6-655P-201ENST00000362858 107 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 RNU6-43P-201ENST00000384302 107 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 MIR489-201ENST00000384923 84 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 RNU6-220P-201ENST00000390919 107 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 MICF-203ENST00000432679 129 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 USP9YP8-201ENST00000441913 500 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.78□□□□□ -1.96
USP38Q8NB14 AL031659.1-201ENST00000447075 539 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 AC090515.1-201ENST00000465295 476 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.78□□□□□ -1.96
USP38Q8NB14 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.78□□□□□ -1.96
USP38Q8NB14 AC108729.3-201ENST00000513484 108 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 AP005902.1-201ENST00000521358 186 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 AP005639.2-201ENST00000527592 928 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms