Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 MIR448-201ENST00000362131 111 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 RNU4-35P-201ENST00000362588 141 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 Y_RNA.217-201ENST00000364214 105 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 RNU6-142P-201ENST00000384019 107 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 MIR329-1-201ENST00000385028 80 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 RNU6-1168P-201ENST00000390831 104 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 RNU5E-9P-201ENST00000411164 104 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 AC004552.1-201ENST00000419089 348 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 COTL1P1-201ENST00000422309 375 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 AC024067.1-201ENST00000426199 223 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 AL590383.1-201ENST00000428602 75 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 AC243964.1-201ENST00000441814 261 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 RBMY2UP-201ENST00000453474 324 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 Y_RNA.641-201ENST00000459414 105 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 RPS26P3-201ENST00000470205 348 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 UBL5P3-201ENST00000475112 231 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 AC090543.2-201ENST00000483963 348 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 AC004057.1-201ENST00000485827 348 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 RNU2-27P-201ENST00000516185 142 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 AP004607.1-201ENST00000524456 203 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 AC016256.1-201ENST00000547971 354 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 AL391261.3-201ENST00000557194 520 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 MIR5692C2-201ENST00000577959 77 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 MIR5695-201ENST00000579717 85 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 IPO8P1-201ENST00000455509 3109 ntBASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TMEFF1Q8IYR6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 Y_RNA.319-201ENST00000365138 92 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 RNU6-1130P-201ENST00000365434 107 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 SNORA22C-201ENST00000384614 134 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 Y_RNA.568-201ENST00000384742 113 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 MIR493-201ENST00000385254 89 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 RNU6-159P-201ENST00000391080 106 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 RNU6-131P-201ENST00000391144 107 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 AL031121.1-201ENST00000406553 254 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 RNA5SP239-201ENST00000410218 129 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 RNU6-1001P-201ENST00000411265 100 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 AC140059.1-201ENST00000489238 361 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 TRBV12-2-201ENST00000489763 344 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 RNU6-1198P-201ENST00000516904 67 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 EIF4BP1-201ENST00000554881 351 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 AC005176.2-201ENST00000596933 147 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 AL356157.2-201ENST00000605122 111 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 MIR8057-201ENST00000620957 69 ntBASIC3.59□□□□□ -1.83
TMEFF1Q8IYR6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
TMEFF1Q8IYR6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 RNU5B-2P-201ENST00000363036 113 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 RNU6-449P-201ENST00000383914 107 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 Y_RNA.400-201ENST00000383963 111 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 U8.10-201ENST00000384260 133 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 Y_RNA.488-201ENST00000384403 102 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 HLFP1-201ENST00000402375 499 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 MTHFD2P2-201ENST00000407725 247 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 MIR1261-201ENST00000408659 82 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 RNU6-1245P-201ENST00000411130 106 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 AL160275.2-201ENST00000412010 394 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 AL162725.1-201ENST00000435405 301 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 SNRPEP9-201ENST00000436794 238 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 AC009237.8-201ENST00000445492 379 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 RPL23AP3-201ENST00000453844 468 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 RNU6-58P-201ENST00000517143 103 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 TRAV28-201ENST00000557548 323 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 AL138963.2-201ENST00000605137 226 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 U4.6-201ENST00000621618 127 ntBASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TMEFF1Q8IYR6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TMEFF1Q8IYR6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TMEFF1Q8IYR6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms