Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 AL020997.2-201ENST00000602607 184 ntBASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 AL137849.1-201ENST00000604767 169 ntBASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 AC004467.1-201ENST00000615678 330 ntBASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 MIR3199-2-201ENST00000636243 86 ntBASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
RNF111Q6ZNA4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 AC092593.1-201ENST00000515413 1815 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 AC106871.1-201ENST00000568324 3102 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 RNU6-799P-201ENST00000363567 107 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 Y_RNA.262-201ENST00000364641 102 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 Y_RNA.398-201ENST00000383952 99 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 RNU6-793P-201ENST00000384233 104 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 MIR613-201ENST00000385248 95 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 AL133475.1-201ENST00000404414 305 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 RAB28P5-201ENST00000427490 651 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 RPS29P7-201ENST00000439662 171 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 AL161651.1-201ENST00000440882 223 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 RAC1P2-201ENST00000511164 579 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 AC074133.1-201ENST00000515696 183 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 RN7SL703P-201ENST00000578485 302 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 AC091932.3-201ENST00000624223 323 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 SNORD98-201ENST00000636377 67 ntBASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.61□□□□□ -1.83
RNF111Q6ZNA4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 RNU5F-3P-201ENST00000363767 117 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 RNU4-56P-201ENST00000364700 142 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 Y_RNA.304-201ENST00000365011 112 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 RNU6-487P-201ENST00000365430 104 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 MIR208B-201ENST00000401172 77 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 SNORA57.3-201ENST00000411095 141 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 ELOCP21-201ENST00000412558 336 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 MTATP6P29-201ENST00000415057 132 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 OOSP1P1-201ENST00000423265 274 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 SNORA71B-202ENST00000439232 272 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 AL121594.1-201ENST00000475906 575 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 RN7SL323P-201ENST00000494712 295 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 RNU6-191P-201ENST00000516295 94 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 RNU6-155P-201ENST00000516347 100 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 CYCSP30-201ENST00000546447 172 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 AL365265.1-201ENST00000621045 234 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 AL354798.1-201ENST00000622505 329 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 snoU18.1-201ENST00000629629 71 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 AC007656.2-201ENST00000624902 4547 ntBASIC3.6□□□□□ -1.83
RNF111Q6ZNA4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 AC099654.7-201ENST00000635788 2127 ntBASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 CUL1P1-201ENST00000509510 2425 ntBASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 AC058791.1-201ENST00000608412 3198 ntBASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 RNU6-704P-201ENST00000364162 103 ntBASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 SNORD113-1-201ENST00000365321 69 ntBASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 RNU6-211P-201ENST00000384047 107 ntBASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 MIR199A2-201ENST00000385289 110 ntBASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 RNU6-394P-201ENST00000410735 107 ntBASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 RPS15AP5-201ENST00000436276 388 ntBASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 IFNA11P-201ENST00000446352 526 ntBASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 snoU13.28-201ENST00000459235 104 ntBASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 AC007215.1-201ENST00000464893 276 ntBASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 RNA5SP164-201ENST00000516533 110 ntBASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 CYCSP23-201ENST00000519781 313 ntBASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF111Q6ZNA4 AP005660.1-201ENST00000522972 293 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms