Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RNU6-12P-201ENST00000384604 107 ntBASIC4.34□□□□□ -1.71
FOXR1Q6PIV2 RNU6-41P-201ENST00000384741 107 ntBASIC4.34□□□□□ -1.71
FOXR1Q6PIV2 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXR1Q6PIV2 AL591034.1-201ENST00000407447 340 ntBASIC4.34□□□□□ -1.71
FOXR1Q6PIV2 RNU6-383P-201ENST00000410864 94 ntBASIC4.34□□□□□ -1.71
FOXR1Q6PIV2 AC004386.2-201ENST00000441858 148 ntBASIC4.34□□□□□ -1.71
FOXR1Q6PIV2 AL158147.1-201ENST00000443970 75 ntBASIC4.34□□□□□ -1.71
FOXR1Q6PIV2 SNORA70.16-201ENST00000516390 95 ntBASIC4.34□□□□□ -1.71
FOXR1Q6PIV2 RNU6-1061P-201ENST00000516530 99 ntBASIC4.34□□□□□ -1.71
FOXR1Q6PIV2 RNA5SP291-201ENST00000517222 105 ntBASIC4.34□□□□□ -1.71
FOXR1Q6PIV2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXR1Q6PIV2 AC021231.3-201ENST00000558497 370 ntBASIC4.34□□□□□ -1.71
FOXR1Q6PIV2 AC053481.4-201ENST00000583164 216 ntBASIC4.34□□□□□ -1.71
FOXR1Q6PIV2 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXR1Q6PIV2 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXR1Q6PIV2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
FOXR1Q6PIV2 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
FOXR1Q6PIV2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 CENPCP1-201ENST00000533085 2578 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 U8.1-201ENST00000362843 134 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 RNU6-356P-201ENST00000384140 107 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 RHEBP3-201ENST00000411920 351 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 RPL39P29-201ENST00000447779 157 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 SNORA84-201ENST00000459229 133 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 RN7SL98P-201ENST00000462271 300 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 AC010285.1-201ENST00000470580 392 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 Y_RNA.677-201ENST00000516401 85 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 RNU6-537P-201ENST00000517277 103 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 CR383656.8-201ENST00000549046 145 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 AC133485.4-201ENST00000561835 220 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 AC138907.4-201ENST00000570107 226 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 AC120024.3-201ENST00000603167 156 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 uc_338.28-201ENST00000612082 187 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 U2.21-201ENST00000637295 81 ntBASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXR1Q6PIV2 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 RNU6-1205P-201ENST00000363625 106 ntBASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 RNU5F-3P-201ENST00000363767 117 ntBASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 RNU6-728P-201ENST00000365375 104 ntBASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 RNU6-140P-201ENST00000384566 108 ntBASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 RNU6-1228P-201ENST00000391014 107 ntBASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 Y_RNA.584-201ENST00000391090 114 ntBASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 YPEL5P1-201ENST00000419731 367 ntBASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 AC078809.1-201ENST00000427601 140 ntBASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 RPL31P41-201ENST00000477967 372 ntBASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 RPS29P24-201ENST00000486345 171 ntBASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 RPL21P129-201ENST00000491732 478 ntBASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 AC034105.4-201ENST00000568304 277 ntBASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 AL591034.3-201ENST00000605511 685 ntBASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 AC006065.5-201ENST00000623427 349 ntBASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXR1Q6PIV2 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 SPRR2C-201ENST00000290702 219 ntBASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 MIR383-201ENST00000362257 73 ntBASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 RNU1-18P-201ENST00000363062 164 ntBASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 RNU6-778P-201ENST00000363269 103 ntBASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 Y_RNA.310-201ENST00000365063 113 ntBASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 MIR3074-201ENST00000384885 81 ntBASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 MIR548A3-201ENST00000385297 97 ntBASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 SNORA26.3-201ENST00000391119 136 ntBASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 RNU6-855P-201ENST00000410395 104 ntBASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 AC023632.4-201ENST00000517783 191 ntBASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 AP004371.1-201ENST00000525240 214 ntBASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 TVP23BP1-201ENST00000557500 617 ntBASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 Y_RNA.757-201ENST00000578934 114 ntBASIC4.31□□□□□ -1.72
FOXR1Q6PIV2 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms