Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 CUL1P1-201ENST00000509510 2425 ntBASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRPF40BQ6NWY9 Y_RNA.44-201ENST00000362676 108 ntBASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 Y_RNA.180-201ENST00000363867 113 ntBASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 SNORA80A-201ENST00000363922 136 ntBASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 RNU5A-5P-201ENST00000411054 116 ntBASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 AL139156.1-201ENST00000412785 841 ntBASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 RPS27AP10-201ENST00000496103 208 ntBASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 RNU6-579P-201ENST00000516879 102 ntBASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 AC011602.1-201ENST00000546484 331 ntBASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 CR383656.8-201ENST00000549046 145 ntBASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 NACAP3-201ENST00000552100 481 ntBASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 AC073308.1-201ENST00000623696 305 ntBASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 HAUS6P2-201ENST00000433254 2404 ntBASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF40BQ6NWY9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 RNU6-1159P-201ENST00000362933 107 ntBASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 Y_RNA.199-201ENST00000364014 102 ntBASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 RNU6-514P-201ENST00000384208 107 ntBASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 RNU6-1035P-201ENST00000384477 107 ntBASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 U3.39-201ENST00000408569 239 ntBASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 RNU4-30P-201ENST00000410245 143 ntBASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 WARS2P1-201ENST00000429678 537 ntBASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 Y_RNA.644-201ENST00000459006 113 ntBASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 Y_RNA.674-201ENST00000516362 113 ntBASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 RN7SKP49-201ENST00000516675 260 ntBASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 AC027288.2-201ENST00000553028 243 ntBASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 SNORA43.4-201ENST00000629559 138 ntBASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.25□□□□□ -1.73
PRPF40BQ6NWY9 AC068647.1-201ENST00000489539 2265 ntBASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 RNU5B-2P-201ENST00000363036 113 ntBASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 RNU6-1141P-201ENST00000364520 107 ntBASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 HSPE1P26-201ENST00000405341 275 ntBASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 AC007969.2-201ENST00000441891 191 ntBASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 RPS4XP22-201ENST00000480755 780 ntBASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 AC006445.1-201ENST00000491925 405 ntBASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 RNU6-928P-201ENST00000516876 104 ntBASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 RNU6-1198P-201ENST00000516904 67 ntBASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 RNU2-31P-201ENST00000516954 155 ntBASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 UBL5P4-201ENST00000562584 236 ntBASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF40BQ6NWY9 AL365361.1-201ENST00000566942 3481 ntBASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 SNORA25.1-201ENST00000362326 128 ntBASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 MIR10B-201ENST00000385011 110 ntBASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 RNU2-37P-201ENST00000410695 177 ntBASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 RNU6-1001P-201ENST00000411265 100 ntBASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 HMGN2P16-201ENST00000456802 261 ntBASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 RPS29P20-201ENST00000489592 171 ntBASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 RNU6-581P-201ENST00000516214 105 ntBASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 AC024405.2-202ENST00000532731 184 ntBASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 AC026333.2-201ENST00000542164 106 ntBASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 AC009163.5-201ENST00000575421 637 ntBASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 MIR4644-201ENST00000579929 84 ntBASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 AL033523.1-201ENST00000605153 153 ntBASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 AC004825.2-201ENST00000616634 455 ntBASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 MIR3529-201ENST00000637713 78 ntBASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.23□□□□□ -1.73
PRPF40BQ6NWY9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 RNU6-326P-201ENST00000365480 107 ntBASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 U8.10-201ENST00000384260 133 ntBASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms