Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 RNA5SP229-201ENST00000410809 99 ntBASIC3.61□□□□□ -1.83
E4F1Q66K89 AL590135.1-201ENST00000422215 156 ntBASIC3.61□□□□□ -1.83
E4F1Q66K89 AC019205.3-201ENST00000424573 156 ntBASIC3.61□□□□□ -1.83
E4F1Q66K89 PTGES3P4-201ENST00000426243 356 ntBASIC3.61□□□□□ -1.83
E4F1Q66K89 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.61□□□□□ -1.83
E4F1Q66K89 AC004383.1-201ENST00000438135 289 ntBASIC3.61□□□□□ -1.83
E4F1Q66K89 AC115115.1-201ENST00000449927 248 ntBASIC3.61□□□□□ -1.83
E4F1Q66K89 SNORD105B-201ENST00000458770 79 ntBASIC3.61□□□□□ -1.83
E4F1Q66K89 SNRPGP3-201ENST00000469405 227 ntBASIC3.61□□□□□ -1.83
E4F1Q66K89 AP002884.2-201ENST00000471647 395 ntBASIC3.61□□□□□ -1.83
E4F1Q66K89 AC092185.1-201ENST00000491371 97 ntBASIC3.61□□□□□ -1.83
E4F1Q66K89 RNA5SP217-201ENST00000515959 91 ntBASIC3.61□□□□□ -1.83
E4F1Q66K89 RN7SKP18-201ENST00000516005 275 ntBASIC3.61□□□□□ -1.83
E4F1Q66K89 RNU6-58P-201ENST00000517143 103 ntBASIC3.61□□□□□ -1.83
E4F1Q66K89 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.61□□□□□ -1.83
E4F1Q66K89 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.61□□□□□ -1.83
E4F1Q66K89 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.61□□□□□ -1.83
E4F1Q66K89 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.61□□□□□ -1.83
E4F1Q66K89 AC068831.7-201ENST00000616954 363 ntBASIC3.61□□□□□ -1.83
E4F1Q66K89 AC009093.8-201ENST00000641769 292 ntBASIC3.61□□□□□ -1.83
E4F1Q66K89 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.61□□□□□ -1.83
E4F1Q66K89 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
E4F1Q66K89 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
E4F1Q66K89 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.61□□□□□ -1.83
E4F1Q66K89 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.61□□□□□ -1.83
E4F1Q66K89 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
E4F1Q66K89 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
E4F1Q66K89 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.6□□□□□ -1.83
E4F1Q66K89 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
E4F1Q66K89 MIR335-201ENST00000362173 94 ntBASIC3.6□□□□□ -1.83
E4F1Q66K89 SNORD81.1-201ENST00000363064 77 ntBASIC3.6□□□□□ -1.83
E4F1Q66K89 Y_RNA.541-201ENST00000384640 113 ntBASIC3.6□□□□□ -1.83
E4F1Q66K89 RNA5SP38-201ENST00000410750 119 ntBASIC3.6□□□□□ -1.83
E4F1Q66K89 RNU6-1001P-201ENST00000411265 100 ntBASIC3.6□□□□□ -1.83
E4F1Q66K89 AL139109.1-201ENST00000455491 297 ntBASIC3.6□□□□□ -1.83
E4F1Q66K89 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.6□□□□□ -1.83
E4F1Q66K89 SNORA31.16-201ENST00000516773 139 ntBASIC3.6□□□□□ -1.83
E4F1Q66K89 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.6□□□□□ -1.83
E4F1Q66K89 MIR3922-201ENST00000585192 84 ntBASIC3.6□□□□□ -1.83
E4F1Q66K89 AC039056.2-201ENST00000622261 511 ntBASIC3.6□□□□□ -1.83
E4F1Q66K89 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.6□□□□□ -1.83
E4F1Q66K89 AL450472.1-202ENST00000637286 180 ntBASIC3.6□□□□□ -1.83
E4F1Q66K89 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
E4F1Q66K89 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
E4F1Q66K89 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.6□□□□□ -1.83
E4F1Q66K89 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
E4F1Q66K89 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.6□□□□□ -1.83
E4F1Q66K89 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
E4F1Q66K89 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
E4F1Q66K89 RNU6-487P-201ENST00000365430 104 ntBASIC3.59□□□□□ -1.83
E4F1Q66K89 RNU6-102P-201ENST00000384485 104 ntBASIC3.59□□□□□ -1.83
E4F1Q66K89 Y_RNA.581-201ENST00000391017 97 ntBASIC3.59□□□□□ -1.83
E4F1Q66K89 RNA5SP213-201ENST00000391031 106 ntBASIC3.59□□□□□ -1.83
E4F1Q66K89 RNU6-159P-201ENST00000391080 106 ntBASIC3.59□□□□□ -1.83
E4F1Q66K89 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.59□□□□□ -1.83
E4F1Q66K89 AC138623.1-201ENST00000418060 216 ntBASIC3.59□□□□□ -1.83
E4F1Q66K89 AL714022.1-201ENST00000439897 151 ntBASIC3.59□□□□□ -1.83
E4F1Q66K89 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.59□□□□□ -1.83
E4F1Q66K89 SNORA31.6-201ENST00000516241 130 ntBASIC3.59□□□□□ -1.83
E4F1Q66K89 RNU6-1198P-201ENST00000516904 67 ntBASIC3.59□□□□□ -1.83
E4F1Q66K89 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.59□□□□□ -1.83
E4F1Q66K89 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.59□□□□□ -1.83
E4F1Q66K89 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
E4F1Q66K89 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
E4F1Q66K89 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.58□□□□□ -1.84
E4F1Q66K89 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
E4F1Q66K89 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
E4F1Q66K89 AC008264.2-201ENST00000610193 3731 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 Y_RNA.20-201ENST00000362479 113 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 Y_RNA.65-201ENST00000362846 100 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 RNU6-1285P-201ENST00000363480 105 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 RNU6-338P-201ENST00000383888 105 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 RNU6-281P-201ENST00000384212 103 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 U3.19-201ENST00000390893 196 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 AL603910.2-201ENST00000407268 136 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 RN7SKP111-201ENST00000410349 271 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 AC012306.1-201ENST00000423267 114 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 AL358075.3-201ENST00000426289 226 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 MTND5P15-201ENST00000434246 349 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 CST9LP2-201ENST00000437612 320 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 AP000705.1-201ENST00000454567 350 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 AC090525.1-201ENST00000479116 478 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.58□□□□□ -1.84
E4F1Q66K89 RN7SKP49-201ENST00000516675 260 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.58□□□□□ -1.84
E4F1Q66K89 AC105137.2-201ENST00000569073 466 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 MIR4697-201ENST00000582977 78 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.58□□□□□ -1.84
E4F1Q66K89 AC091152.3-201ENST00000604227 325 ntBASIC3.58□□□□□ -1.84
E4F1Q66K89 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
E4F1Q66K89 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.58□□□□□ -1.84
E4F1Q66K89 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.57□□□□□ -1.84
E4F1Q66K89 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.57□□□□□ -1.84
E4F1Q66K89 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.57□□□□□ -1.84
E4F1Q66K89 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
E4F1Q66K89 Y_RNA.352-201ENST00000365439 102 ntBASIC3.57□□□□□ -1.84
E4F1Q66K89 SNORA46-201ENST00000384762 135 ntBASIC3.57□□□□□ -1.84
E4F1Q66K89 AC005002.2-201ENST00000438228 269 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms