Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.63□□□□□ -1.67
RNF20Q5VTR2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF20Q5VTR2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF20Q5VTR2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF20Q5VTR2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF20Q5VTR2 FAM35BP-202ENST00000497389 3337 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.62□□□□□ -1.67
RNF20Q5VTR2 RNU6-275P-201ENST00000364910 107 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 RNU6-245P-201ENST00000384020 107 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 RNU6-239P-201ENST00000390990 99 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 RNA5SP390-201ENST00000410191 113 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 AC099548.1-201ENST00000421443 426 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.62□□□□□ -1.67
RNF20Q5VTR2 RNU6-436P-201ENST00000516171 114 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 ACA59.2-201ENST00000517061 156 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 AC100767.1-201ENST00000528178 123 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 DEFB131C-201ENST00000528817 165 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF20Q5VTR2 NACAP3-201ENST00000552100 481 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.62□□□□□ -1.67
RNF20Q5VTR2 MIR548X2-201ENST00000579776 100 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 MIR4644-201ENST00000579929 84 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 AC090616.3-201ENST00000582184 217 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 AC024220.1-201ENST00000603675 484 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 AL162713.1-201ENST00000604480 262 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 AC083809.1-201ENST00000615051 472 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 MIR6500-201ENST00000622700 86 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 AL034408.1-202ENST00000636088 415 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 AC010332.2-201ENST00000613083 1904 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF20Q5VTR2 AC022336.2-201ENST00000568966 2538 ntBASIC4.62□□□□□ -1.67
RNF20Q5VTR2 RNA5SP443-201ENST00000363083 132 ntBASIC4.61□□□□□ -1.67
RNF20Q5VTR2 RNA5SP515-201ENST00000364570 118 ntBASIC4.61□□□□□ -1.67
RNF20Q5VTR2 RNU6-622P-201ENST00000384272 103 ntBASIC4.61□□□□□ -1.67
RNF20Q5VTR2 RNU1-13P-201ENST00000384499 162 ntBASIC4.61□□□□□ -1.67
RNF20Q5VTR2 U3.26-201ENST00000391236 204 ntBASIC4.61□□□□□ -1.67
RNF20Q5VTR2 U3.40-201ENST00000408706 208 ntBASIC4.61□□□□□ -1.67
RNF20Q5VTR2 CRYBB2P1-203ENST00000415709 538 ntBASIC4.61□□□□□ -1.67
RNF20Q5VTR2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF20Q5VTR2 AL162151.2-201ENST00000448875 158 ntBASIC4.61□□□□□ -1.67
RNF20Q5VTR2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF20Q5VTR2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF20Q5VTR2 SNORD98-201ENST00000636377 67 ntBASIC4.61□□□□□ -1.67
RNF20Q5VTR2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RNF20Q5VTR2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF20Q5VTR2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RNF20Q5VTR2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF20Q5VTR2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RNF20Q5VTR2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF20Q5VTR2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
RNF20Q5VTR2 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF20Q5VTR2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF20Q5VTR2 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF20Q5VTR2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF20Q5VTR2 SPRR2C-201ENST00000290702 219 ntBASIC4.6□□□□□ -1.67
RNF20Q5VTR2 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.6□□□□□ -1.67
RNF20Q5VTR2 RNU4-10P-201ENST00000364383 140 ntBASIC4.6□□□□□ -1.67
RNF20Q5VTR2 AC068538.1-201ENST00000376856 336 ntBASIC4.6□□□□□ -1.67
RNF20Q5VTR2 SNORA18.3-201ENST00000384122 132 ntBASIC4.6□□□□□ -1.67
RNF20Q5VTR2 SNORA20-201ENST00000384662 132 ntBASIC4.6□□□□□ -1.67
RNF20Q5VTR2 RNU6-381P-201ENST00000391259 108 ntBASIC4.6□□□□□ -1.67
RNF20Q5VTR2 AC103975.1-201ENST00000482506 483 ntBASIC4.6□□□□□ -1.67
RNF20Q5VTR2 SNORA25.12-201ENST00000516202 82 ntBASIC4.6□□□□□ -1.67
RNF20Q5VTR2 RNA5SP164-201ENST00000516533 110 ntBASIC4.6□□□□□ -1.67
RNF20Q5VTR2 RNU6-971P-201ENST00000516920 106 ntBASIC4.6□□□□□ -1.67
RNF20Q5VTR2 MIR2116-201ENST00000517221 80 ntBASIC4.6□□□□□ -1.67
RNF20Q5VTR2 CYP4A27P-201ENST00000567218 190 ntBASIC4.6□□□□□ -1.67
RNF20Q5VTR2 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF20Q5VTR2 MIR3690-201ENST00000580266 75 ntBASIC4.6□□□□□ -1.67
RNF20Q5VTR2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF20Q5VTR2 AC244205.2-202ENST00000635781 342 ntBASIC4.6□□□□□ -1.67
RNF20Q5VTR2 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF20Q5VTR2 AC073073.2-201ENST00000609827 2578 ntBASIC4.6□□□□□ -1.67
RNF20Q5VTR2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF20Q5VTR2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF20Q5VTR2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF20Q5VTR2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF20Q5VTR2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF20Q5VTR2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF20Q5VTR2 RNU1-62P-201ENST00000362599 164 ntBASIC4.59□□□□□ -1.67
RNF20Q5VTR2 SNORA70.2-201ENST00000364506 135 ntBASIC4.59□□□□□ -1.67
RNF20Q5VTR2 Y_RNA.415-201ENST00000384012 112 ntBASIC4.59□□□□□ -1.67
RNF20Q5VTR2 SNORA40-201ENST00000388090 126 ntBASIC4.59□□□□□ -1.67
RNF20Q5VTR2 BPY2DP-201ENST00000422208 265 ntBASIC4.59□□□□□ -1.67
RNF20Q5VTR2 AC005300.1-201ENST00000428401 373 ntBASIC4.59□□□□□ -1.67
RNF20Q5VTR2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.59□□□□□ -1.67
RNF20Q5VTR2 AC021269.2-201ENST00000532318 330 ntBASIC4.59□□□□□ -1.67
RNF20Q5VTR2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
RNF20Q5VTR2 AC006199.1-201ENST00000548728 219 ntBASIC4.59□□□□□ -1.67
RNF20Q5VTR2 PARP1P2-201ENST00000556806 195 ntBASIC4.59□□□□□ -1.67
RNF20Q5VTR2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF20Q5VTR2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF20Q5VTR2 AC244505.7-201ENST00000599675 272 ntBASIC4.59□□□□□ -1.67
RNF20Q5VTR2 AL137849.1-201ENST00000604767 169 ntBASIC4.59□□□□□ -1.67
RNF20Q5VTR2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF20Q5VTR2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.59□□□□□ -1.67
RNF20Q5VTR2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF20Q5VTR2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.68
RNF20Q5VTR2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.59□□□□□ -1.68
RNF20Q5VTR2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms