Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC015911.1-201ENST00000495111 156 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 MTCYBP18-201ENST00000501056 747 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC097473.1-201ENST00000508142 408 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC108729.3-201ENST00000513484 108 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 AP003034.1-201ENST00000534621 422 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC023050.3-201ENST00000541142 333 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC098848.2-201ENST00000588023 330 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC023043.2-201ENST00000589678 1026 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 BNIP3P16-201ENST00000589779 534 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 BNIP3P8-201ENST00000597863 560 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 BNIP3P39-201ENST00000601077 554 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC016727.1-205ENST00000605437 569 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 AC011155.2-201ENST00000623202 216 ntBASIC1.12□□□□□ -2.23
ZNF404Q494X3 RNU6-414P-201ENST00000363705 104 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 RNU4-56P-201ENST00000364700 142 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 RNY4P34-201ENST00000364779 95 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 RNU6-336P-201ENST00000364891 107 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 MIR1267-201ENST00000408723 78 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 RPL23AP36-201ENST00000413895 458 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 RPL21P111-201ENST00000418453 477 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 RPL30P13-201ENST00000418873 348 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
ZNF404Q494X3 Z82205.1-201ENST00000428456 297 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 GTF2IP13-201ENST00000438487 386 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.11□□□□□ -2.23
ZNF404Q494X3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.11□□□□□ -2.23
ZNF404Q494X3 AC079781.2-201ENST00000446424 169 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 MTCYBP1-201ENST00000454315 1119 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 SNRPFP4-201ENST00000456366 242 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 AL162395.1-201ENST00000457882 422 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.11□□□□□ -2.23
ZNF404Q494X3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.11□□□□□ -2.23
ZNF404Q494X3 AC005178.1-201ENST00000508392 440 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 SNORA31.16-201ENST00000516773 139 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 AC109479.2-201ENST00000517842 174 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.11□□□□□ -2.23
ZNF404Q494X3 AC109446.1-201ENST00000566172 220 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.11□□□□□ -2.23
ZNF404Q494X3 MIR548AB-201ENST00000584917 84 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 AC107304.1-201ENST00000604229 296 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 AC068787.1-201ENST00000623908 691 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
ZNF404Q494X3 MTND5P9-201ENST00000503854 1755 ntBASIC1.11□□□□□ -2.23
ZNF404Q494X3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.11□□□□□ -2.23
ZNF404Q494X3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
ZNF404Q494X3 AL391987.6-201ENST00000305671 199 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 RNU6-428P-201ENST00000362942 107 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 RNU6-438P-201ENST00000365561 103 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 RNU6-296P-201ENST00000384608 107 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 RNU1-78P-201ENST00000391248 165 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 MTCYBP2-201ENST00000407745 171 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 RPS3AP3-201ENST00000411933 242 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 Z99497.1-201ENST00000421282 135 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.1□□□□□ -2.23
ZNF404Q494X3 AC139712.2-201ENST00000424302 339 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.1□□□□□ -2.23
ZNF404Q494X3 GPR143P-201ENST00000434155 205 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 SNRPEP8-201ENST00000442866 260 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 RPS27AP8-201ENST00000452665 445 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 HMGN1P13-201ENST00000505795 138 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 ATP5EP1-201ENST00000510257 156 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.1□□□□□ -2.23
ZNF404Q494X3 SUMO2P18-201ENST00000518873 252 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 AP003033.1-201ENST00000527244 415 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.1□□□□□ -2.23
ZNF404Q494X3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.1□□□□□ -2.23
ZNF404Q494X3 MIR3682-201ENST00000581338 84 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.1□□□□□ -2.23
ZNF404Q494X3 AC012507.3-201ENST00000603556 477 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 Z99289.3-201ENST00000605586 594 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 AL353770.2-201ENST00000620024 78 ntBASIC1.1□□□□□ -2.23
ZNF404Q494X3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.1□□□□□ -2.23
ZNF404Q494X3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.1□□□□□ -2.23
ZNF404Q494X3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
ZNF404Q494X3 MTND4P4-201ENST00000439033 1366 ntBASIC1.09□□□□□ -2.23
ZNF404Q494X3 MIR340-201ENST00000362125 95 ntBASIC1.09□□□□□ -2.23
ZNF404Q494X3 MIR454-201ENST00000390180 115 ntBASIC1.09□□□□□ -2.23
ZNF404Q494X3 SNORA40.6-201ENST00000391153 128 ntBASIC1.09□□□□□ -2.23
ZNF404Q494X3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.09□□□□□ -2.23
ZNF404Q494X3 UBE2V1P8-201ENST00000437166 265 ntBASIC1.09□□□□□ -2.23
ZNF404Q494X3 AC092473.1-201ENST00000441098 221 ntBASIC1.09□□□□□ -2.23
ZNF404Q494X3 AC004223.1-201ENST00000479840 271 ntBASIC1.09□□□□□ -2.23
ZNF404Q494X3 RNA5SP503-201ENST00000517047 117 ntBASIC1.09□□□□□ -2.23
ZNF404Q494X3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.09□□□□□ -2.23
ZNF404Q494X3 HSPE1P4-201ENST00000550617 308 ntBASIC1.09□□□□□ -2.23
ZNF404Q494X3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.09□□□□□ -2.23
ZNF404Q494X3 MIR3660-201ENST00000584845 100 ntBASIC1.09□□□□□ -2.23
ZNF404Q494X3 AC092354.1-201ENST00000606057 376 ntBASIC1.09□□□□□ -2.23
ZNF404Q494X3 AC008250.2-201ENST00000615261 205 ntBASIC1.09□□□□□ -2.23
ZNF404Q494X3 AL157834.3-201ENST00000615543 103 ntBASIC1.09□□□□□ -2.23
ZNF404Q494X3 AC068205.3-201ENST00000636385 468 ntBASIC1.09□□□□□ -2.23
ZNF404Q494X3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.08□□□□□ -2.24
ZNF404Q494X3 U3.4-201ENST00000363352 213 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 RNU6-271P-201ENST00000363858 105 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms