Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MTND4P19-201ENST00000446659 478 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 TOMM22P6-201ENST00000465035 409 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 RN7SL442P-201ENST00000473804 320 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.9□□□□□ -1.95
SUMO3P55854 AC074250.1-201ENST00000511117 192 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 AP003072.1-201ENST00000531740 145 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 AC092447.9-201ENST00000603395 144 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 Y_RNA.812-201ENST00000610788 101 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 PCGEM1.1-201ENST00000613431 131 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 Y_RNA.784-201ENST00000613803 101 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 AC083806.3-201ENST00000614016 455 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 Y_RNA.787-201ENST00000616522 101 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 Y_RNA.780-201ENST00000617336 101 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 AC087588.2-201ENST00000617667 426 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 AC007742.2-201ENST00000618226 398 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 Y_RNA.801-201ENST00000619005 101 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.9□□□□□ -1.95
SUMO3P55854 AC093010.3-201ENST00000570269 15214 ntBASIC2.9□□□□□ -1.95
SUMO3P55854 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
SUMO3P55854 AC000403.1-201ENST00000613696 3585 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
SUMO3P55854 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
SUMO3P55854 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.89□□□□□ -1.95
SUMO3P55854 RNU6-874P-201ENST00000362390 105 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 SNORD56.3-201ENST00000363507 71 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 SNORD115-8-201ENST00000363856 82 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 SNORD115-38-201ENST00000365037 82 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 Y_RNA.364-201ENST00000365532 101 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SUMO3P55854 SNORA22B-201ENST00000383876 138 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 SNORA7.4-201ENST00000384249 137 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 SNORA69.1-201ENST00000390904 137 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 MIR208B-201ENST00000401172 77 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 SNORA11-201ENST00000408789 128 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 HMGB3P2-201ENST00000411913 584 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 MCFD2P1-201ENST00000417812 300 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.89□□□□□ -1.95
SUMO3P55854 AL590556.1-201ENST00000423231 483 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 Z96811.1-201ENST00000445880 108 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 AC092185.1-201ENST00000491371 97 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 AC145146.1-201ENST00000496370 254 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.89□□□□□ -1.95
SUMO3P55854 SNORA25.10-201ENST00000515926 124 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 RN7SKP272-201ENST00000516988 232 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.89□□□□□ -1.95
SUMO3P55854 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.89□□□□□ -1.95
SUMO3P55854 MIR5680-201ENST00000577577 84 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.89□□□□□ -1.95
SUMO3P55854 AL713866.2-201ENST00000603579 219 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 AL356280.1-201ENST00000603614 379 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 AC006157.1-201ENST00000611750 366 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 MIR5739-201ENST00000619803 80 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 AC243829.7-201ENST00000633081 225 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 MIR622-201ENST00000638396 96 ntBASIC2.89□□□□□ -1.95
SUMO3P55854 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.89□□□□□ -1.95
SUMO3P55854 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SUMO3P55854 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.88□□□□□ -1.95
SUMO3P55854 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SUMO3P55854 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SUMO3P55854 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.88□□□□□ -1.95
SUMO3P55854 Y_RNA.39-201ENST00000362620 98 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 Y_RNA.106-201ENST00000363189 100 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 Y_RNA.132-201ENST00000363421 102 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 SET-203ENST00000372688 801 ntTSL 2 BASIC2.88□□□□□ -1.95
SUMO3P55854 RNU6-1032P-201ENST00000384100 107 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 RNU6-378P-201ENST00000384324 107 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 RNU6-541P-201ENST00000384709 110 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 RNVU1-14-201ENST00000384770 164 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 RNU6-1093P-201ENST00000391194 107 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.88□□□□□ -1.95
SUMO3P55854 RPL23AP22-201ENST00000437556 453 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.88□□□□□ -1.95
SUMO3P55854 RPL21P2-201ENST00000440049 481 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.88□□□□□ -1.95
SUMO3P55854 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.88□□□□□ -1.95
SUMO3P55854 Z75741.1-201ENST00000446793 314 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 EEF1B2P7-201ENST00000451177 676 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 GSTA11P-201ENST00000452866 669 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.88□□□□□ -1.95
SUMO3P55854 RN7SL863P-201ENST00000462370 296 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 AC007215.1-201ENST00000464893 276 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.88□□□□□ -1.95
SUMO3P55854 ANXA2P1-201ENST00000505539 926 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 RNU1-143P-201ENST00000516296 146 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 RNA5SP54-201ENST00000516951 92 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.88□□□□□ -1.95
SUMO3P55854 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
SUMO3P55854 EIF4A1P12-201ENST00000551910 141 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.88□□□□□ -1.95
SUMO3P55854 MIR3117-201ENST00000584034 78 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.88□□□□□ -1.95
SUMO3P55854 U1.23-201ENST00000610293 146 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.88□□□□□ -1.95
SUMO3P55854 RNU1-68P-201ENST00000615382 146 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 U1.39-201ENST00000621562 146 ntBASIC2.88□□□□□ -1.95
SUMO3P55854 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SUMO3P55854 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SUMO3P55854 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SUMO3P55854 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.87□□□□□ -1.95
SUMO3P55854 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms