Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RNF144AP50876 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF144AP50876 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF144AP50876 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNF144AP50876 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNF144AP50876 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
RNF144AP50876 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.17□□□□□ -1.74
RNF144AP50876 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF144AP50876 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
RNF144AP50876 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF144AP50876 Y_RNA.40-201ENST00000362645 93 ntBASIC4.17□□□□□ -1.74
RNF144AP50876 RNA5SP505-201ENST00000364748 108 ntBASIC4.17□□□□□ -1.74
RNF144AP50876 SNORD58C-201ENST00000365223 64 ntBASIC4.17□□□□□ -1.74
RNF144AP50876 SNORD18B-201ENST00000365659 72 ntBASIC4.17□□□□□ -1.74
RNF144AP50876 MIR585-201ENST00000384887 94 ntBASIC4.17□□□□□ -1.74
RNF144AP50876 MIR1278-201ENST00000408753 81 ntBASIC4.17□□□□□ -1.74
RNF144AP50876 HSPE1P12-201ENST00000412576 301 ntBASIC4.17□□□□□ -1.74
RNF144AP50876 HMGN2P20-201ENST00000437531 273 ntBASIC4.17□□□□□ -1.74
RNF144AP50876 RNU6-197P-201ENST00000516680 100 ntBASIC4.17□□□□□ -1.74
RNF144AP50876 AC011602.1-201ENST00000546484 331 ntBASIC4.17□□□□□ -1.74
RNF144AP50876 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF144AP50876 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF144AP50876 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.17□□□□□ -1.74
RNF144AP50876 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
RNF144AP50876 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF144AP50876 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.17□□□□□ -1.74
RNF144AP50876 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF144AP50876 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
RNF144AP50876 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF144AP50876 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF144AP50876 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
RNF144AP50876 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF144AP50876 RNA5SP129-201ENST00000410276 118 ntBASIC4.16□□□□□ -1.74
RNF144AP50876 RPL37P18-201ENST00000411602 243 ntBASIC4.16□□□□□ -1.74
RNF144AP50876 RPEP3-201ENST00000425462 676 ntBASIC4.16□□□□□ -1.74
RNF144AP50876 AC011753.3-201ENST00000443436 406 ntBASIC4.16□□□□□ -1.74
RNF144AP50876 AC073264.2-201ENST00000448886 166 ntBASIC4.16□□□□□ -1.74
RNF144AP50876 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF144AP50876 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF144AP50876 Y_RNA.677-201ENST00000516401 85 ntBASIC4.16□□□□□ -1.74
RNF144AP50876 MIR4700-201ENST00000578311 74 ntBASIC4.16□□□□□ -1.74
RNF144AP50876 POLR3GP1-201ENST00000594073 261 ntBASIC4.16□□□□□ -1.74
RNF144AP50876 RPS15AP11-201ENST00000594193 385 ntBASIC4.16□□□□□ -1.74
RNF144AP50876 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.16□□□□□ -1.74
RNF144AP50876 RPL30P11-203ENST00000598995 310 ntBASIC4.16□□□□□ -1.74
RNF144AP50876 AP003357.1-201ENST00000604497 148 ntBASIC4.16□□□□□ -1.74
RNF144AP50876 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.16□□□□□ -1.74
RNF144AP50876 AC073308.1-201ENST00000623696 305 ntBASIC4.16□□□□□ -1.74
RNF144AP50876 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.16□□□□□ -1.74
RNF144AP50876 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF144AP50876 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.16□□□□□ -1.74
RNF144AP50876 AC011266.1-201ENST00000624119 3569 ntBASIC4.16□□□□□ -1.74
RNF144AP50876 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RNF144AP50876 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RNF144AP50876 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.16□□□□□ -1.74
RNF144AP50876 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.16□□□□□ -1.74
RNF144AP50876 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF144AP50876 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.15□□□□□ -1.74
RNF144AP50876 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.15□□□□□ -1.74
RNF144AP50876 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RNF144AP50876 AC018555.1-201ENST00000567548 1980 ntBASIC4.15□□□□□ -1.74
RNF144AP50876 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF144AP50876 Y_RNA.124-201ENST00000363339 93 ntBASIC4.15□□□□□ -1.75
RNF144AP50876 RNU6-1164P-201ENST00000364428 107 ntBASIC4.15□□□□□ -1.75
RNF144AP50876 RNU6-880P-201ENST00000384526 107 ntBASIC4.15□□□□□ -1.75
RNF144AP50876 RNU6-19P-201ENST00000384718 107 ntBASIC4.15□□□□□ -1.75
RNF144AP50876 MIR548A1-201ENST00000385041 97 ntBASIC4.15□□□□□ -1.75
RNF144AP50876 RN7SKP284-201ENST00000411002 343 ntBASIC4.15□□□□□ -1.75
RNF144AP50876 AL358232.1-201ENST00000448030 501 ntBASIC4.15□□□□□ -1.75
RNF144AP50876 AC105137.1-201ENST00000484355 562 ntBASIC4.15□□□□□ -1.75
RNF144AP50876 AC078918.1-201ENST00000498515 228 ntBASIC4.15□□□□□ -1.75
RNF144AP50876 RNA5SP468-201ENST00000516782 93 ntBASIC4.15□□□□□ -1.75
RNF144AP50876 RNU2-60P-201ENST00000517290 128 ntBASIC4.15□□□□□ -1.75
RNF144AP50876 IGLVIV-65-201ENST00000517313 360 ntBASIC4.15□□□□□ -1.75
RNF144AP50876 HSPE1P18-201ENST00000517602 280 ntBASIC4.15□□□□□ -1.75
RNF144AP50876 AP006289.1-201ENST00000538089 277 ntBASIC4.15□□□□□ -1.75
RNF144AP50876 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.15□□□□□ -1.75
RNF144AP50876 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF144AP50876 AC131055.1-201ENST00000584626 316 ntBASIC4.15□□□□□ -1.75
RNF144AP50876 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.15□□□□□ -1.75
RNF144AP50876 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF144AP50876 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF144AP50876 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.14□□□□□ -1.75
RNF144AP50876 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF144AP50876 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF144AP50876 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF144AP50876 RNU6-647P-201ENST00000364243 107 ntBASIC4.14□□□□□ -1.75
RNF144AP50876 RNU6-1305P-201ENST00000364353 104 ntBASIC4.14□□□□□ -1.75
RNF144AP50876 RNA5SP22-201ENST00000365393 109 ntBASIC4.14□□□□□ -1.75
RNF144AP50876 Y_RNA.432-201ENST00000384087 111 ntBASIC4.14□□□□□ -1.75
RNF144AP50876 RNU6-136P-201ENST00000384663 107 ntBASIC4.14□□□□□ -1.75
RNF144AP50876 MIR607-201ENST00000385241 96 ntBASIC4.14□□□□□ -1.75
RNF144AP50876 RNA5SP496-201ENST00000391240 109 ntBASIC4.14□□□□□ -1.75
RNF144AP50876 RPL23AP54-201ENST00000495129 419 ntBASIC4.14□□□□□ -1.75
RNF144AP50876 PPBPP1-201ENST00000510807 373 ntBASIC4.14□□□□□ -1.75
RNF144AP50876 RNU6-1337P-201ENST00000516525 95 ntBASIC4.14□□□□□ -1.75
RNF144AP50876 HMGN2P15-201ENST00000585707 270 ntBASIC4.14□□□□□ -1.75
RNF144AP50876 AC091905.2-201ENST00000623143 306 ntBASIC4.14□□□□□ -1.75
RNF144AP50876 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RNF144AP50876 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms