Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
MRE11P49959 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
MRE11P49959 Y_RNA.257-201ENST00000364596 102 ntBASIC3.64□□□□□ -1.83
MRE11P49959 SNORA1.3-201ENST00000384676 136 ntBASIC3.64□□□□□ -1.83
MRE11P49959 MT-TW-201ENST00000387382 68 ntBASIC3.64□□□□□ -1.83
MRE11P49959 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.64□□□□□ -1.83
MRE11P49959 SNORA69.1-201ENST00000390904 137 ntBASIC3.64□□□□□ -1.83
MRE11P49959 SNORD88.1-201ENST00000408684 91 ntBASIC3.64□□□□□ -1.83
MRE11P49959 RN7SKP111-201ENST00000410349 271 ntBASIC3.64□□□□□ -1.83
MRE11P49959 AC098614.2-201ENST00000426040 255 ntBASIC3.64□□□□□ -1.83
MRE11P49959 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.64□□□□□ -1.83
MRE11P49959 Z82210.1-201ENST00000440037 231 ntBASIC3.64□□□□□ -1.83
MRE11P49959 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.64□□□□□ -1.83
MRE11P49959 AC079354.2-201ENST00000453523 154 ntBASIC3.64□□□□□ -1.83
MRE11P49959 RPS29P27-201ENST00000463711 170 ntBASIC3.64□□□□□ -1.83
MRE11P49959 RPL30P10-201ENST00000488148 337 ntBASIC3.64□□□□□ -1.83
MRE11P49959 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.64□□□□□ -1.83
MRE11P49959 RNU6-1143P-201ENST00000516125 104 ntBASIC3.64□□□□□ -1.83
MRE11P49959 AC109329.1-201ENST00000518744 317 ntBASIC3.64□□□□□ -1.83
MRE11P49959 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.64□□□□□ -1.83
MRE11P49959 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.64□□□□□ -1.83
MRE11P49959 AC008962.1-201ENST00000605729 304 ntBASIC3.64□□□□□ -1.83
MRE11P49959 AC018692.3-201ENST00000623929 123 ntBASIC3.64□□□□□ -1.83
MRE11P49959 FAM35CP-201ENST00000554755 2470 ntBASIC3.64□□□□□ -1.83
MRE11P49959 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
MRE11P49959 AL136360.1-201ENST00000503377 1900 ntBASIC3.64□□□□□ -1.83
MRE11P49959 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
MRE11P49959 RNU6-806P-201ENST00000365147 105 ntBASIC3.63□□□□□ -1.83
MRE11P49959 Y_RNA.483-201ENST00000384380 101 ntBASIC3.63□□□□□ -1.83
MRE11P49959 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
MRE11P49959 RNU1-101P-201ENST00000391171 127 ntBASIC3.63□□□□□ -1.83
MRE11P49959 SNORA26.7-201ENST00000391288 122 ntBASIC3.63□□□□□ -1.83
MRE11P49959 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.63□□□□□ -1.83
MRE11P49959 MIR1302-6-201ENST00000408466 90 ntBASIC3.63□□□□□ -1.83
MRE11P49959 Y_RNA.592-201ENST00000410274 109 ntBASIC3.63□□□□□ -1.83
MRE11P49959 RNA5SP494-201ENST00000410653 129 ntBASIC3.63□□□□□ -1.83
MRE11P49959 RNA5SP508-201ENST00000411327 119 ntBASIC3.63□□□□□ -1.83
MRE11P49959 MTCO3P19-201ENST00000415864 321 ntBASIC3.63□□□□□ -1.83
MRE11P49959 ARL5AP4-201ENST00000430731 512 ntBASIC3.63□□□□□ -1.83
MRE11P49959 SNRPEP9-201ENST00000436794 238 ntBASIC3.63□□□□□ -1.83
MRE11P49959 RPL39P40-201ENST00000445481 146 ntBASIC3.63□□□□□ -1.83
MRE11P49959 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.63□□□□□ -1.83
MRE11P49959 SNORD127-201ENST00000458892 86 ntBASIC3.63□□□□□ -1.83
MRE11P49959 RNU6-1132P-201ENST00000459214 107 ntBASIC3.63□□□□□ -1.83
MRE11P49959 AC006483.1-201ENST00000487308 313 ntBASIC3.63□□□□□ -1.83
MRE11P49959 SNORA31.1-201ENST00000515993 133 ntBASIC3.63□□□□□ -1.83
MRE11P49959 SNORA31.5-201ENST00000516190 133 ntBASIC3.63□□□□□ -1.83
MRE11P49959 AL390123.1-201ENST00000603216 237 ntBASIC3.63□□□□□ -1.83
MRE11P49959 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.63□□□□□ -1.83
MRE11P49959 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.63□□□□□ -1.83
MRE11P49959 AC099506.2-201ENST00000623074 221 ntBASIC3.63□□□□□ -1.83
MRE11P49959 AC090617.7-201ENST00000623952 126 ntBASIC3.63□□□□□ -1.83
MRE11P49959 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.63□□□□□ -1.83
MRE11P49959 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
MRE11P49959 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
MRE11P49959 Y_RNA.64-201ENST00000362845 102 ntBASIC3.62□□□□□ -1.83
MRE11P49959 RNU6-770P-201ENST00000363929 105 ntBASIC3.62□□□□□ -1.83
MRE11P49959 RNU5E-7P-201ENST00000365290 117 ntBASIC3.62□□□□□ -1.83
MRE11P49959 Y_RNA.376-201ENST00000365638 108 ntBASIC3.62□□□□□ -1.83
MRE11P49959 MIR628-201ENST00000385229 95 ntBASIC3.62□□□□□ -1.83
MRE11P49959 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.62□□□□□ -1.83
MRE11P49959 RPL21P40-201ENST00000428586 483 ntBASIC3.62□□□□□ -1.83
MRE11P49959 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.62□□□□□ -1.83
MRE11P49959 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.62□□□□□ -1.83
MRE11P49959 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.62□□□□□ -1.83
MRE11P49959 RNU6-377P-201ENST00000515965 102 ntBASIC3.62□□□□□ -1.83
MRE11P49959 RNA5SP356-201ENST00000515972 94 ntBASIC3.62□□□□□ -1.83
MRE11P49959 RNU6-397P-201ENST00000516226 104 ntBASIC3.62□□□□□ -1.83
MRE11P49959 Y_RNA.680-201ENST00000516441 93 ntBASIC3.62□□□□□ -1.83
MRE11P49959 SNORA40.15-201ENST00000516884 107 ntBASIC3.62□□□□□ -1.83
MRE11P49959 RNU6-897P-201ENST00000517135 105 ntBASIC3.62□□□□□ -1.83
MRE11P49959 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.62□□□□□ -1.83
MRE11P49959 HSPE1P20-201ENST00000538133 289 ntBASIC3.62□□□□□ -1.83
MRE11P49959 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
MRE11P49959 AMZ2P1-203ENST00000565833 850 ntBASIC3.62□□□□□ -1.83
MRE11P49959 RPS29P30-201ENST00000600975 111 ntBASIC3.62□□□□□ -1.83
MRE11P49959 AC004832.5-201ENST00000608677 401 ntBASIC3.62□□□□□ -1.83
MRE11P49959 AL138880.2-201ENST00000616214 239 ntBASIC3.62□□□□□ -1.83
MRE11P49959 AC078938.1-201ENST00000620993 318 ntBASIC3.62□□□□□ -1.83
MRE11P49959 U4.7-201ENST00000638126 106 ntBASIC3.62□□□□□ -1.83
MRE11P49959 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
MRE11P49959 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
MRE11P49959 AC010615.1-201ENST00000594254 1764 ntBASIC3.61□□□□□ -1.83
MRE11P49959 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MRE11P49959 Y_RNA.19-201ENST00000362462 99 ntBASIC3.61□□□□□ -1.83
MRE11P49959 Y_RNA.350-201ENST00000365409 98 ntBASIC3.61□□□□□ -1.83
MRE11P49959 RPS29P13-201ENST00000402041 169 ntBASIC3.61□□□□□ -1.83
MRE11P49959 AL590004.2-201ENST00000404787 371 ntBASIC3.61□□□□□ -1.83
MRE11P49959 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.61□□□□□ -1.83
MRE11P49959 TMEM167AP1-201ENST00000423409 219 ntBASIC3.61□□□□□ -1.83
MRE11P49959 snoU109.2-201ENST00000459316 135 ntBASIC3.61□□□□□ -1.83
MRE11P49959 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.61□□□□□ -1.83
MRE11P49959 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.61□□□□□ -1.83
MRE11P49959 AC034114.1-201ENST00000520293 285 ntBASIC3.61□□□□□ -1.83
MRE11P49959 AL590705.4-201ENST00000532209 134 ntBASIC3.61□□□□□ -1.83
MRE11P49959 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.61□□□□□ -1.83
MRE11P49959 AC023043.3-201ENST00000593113 385 ntBASIC3.61□□□□□ -1.83
MRE11P49959 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.61□□□□□ -1.83
MRE11P49959 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
MRE11P49959 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms