Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNU7-182P-201ENST00000459009 62 ntBASIC1.32□□□□□ -2.2
RFC3P40938 AC114801.2-201ENST00000503825 781 ntBASIC1.32□□□□□ -2.2
RFC3P40938 AC025465.3-201ENST00000510570 311 ntBASIC1.32□□□□□ -2.2
RFC3P40938 Y_RNA.675-201ENST00000516389 149 ntBASIC1.32□□□□□ -2.2
RFC3P40938 RN7SKP265-201ENST00000516448 223 ntBASIC1.32□□□□□ -2.2
RFC3P40938 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.32□□□□□ -2.2
RFC3P40938 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.32□□□□□ -2.2
RFC3P40938 MIR4421-201ENST00000578133 69 ntBASIC1.32□□□□□ -2.2
RFC3P40938 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.32□□□□□ -2.2
RFC3P40938 AL590229.1-201ENST00000603497 542 ntBASIC1.32□□□□□ -2.2
RFC3P40938 Z99289.3-201ENST00000605586 594 ntBASIC1.32□□□□□ -2.2
RFC3P40938 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
RFC3P40938 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RFC3P40938 RNU6-1303P-201ENST00000364841 107 ntBASIC1.31□□□□□ -2.2
RFC3P40938 RNU6-108P-201ENST00000365558 107 ntBASIC1.31□□□□□ -2.2
RFC3P40938 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RFC3P40938 RNU6-692P-201ENST00000384496 107 ntBASIC1.31□□□□□ -2.2
RFC3P40938 MIR320A-201ENST00000385302 82 ntBASIC1.31□□□□□ -2.2
RFC3P40938 AL031577.2-201ENST00000404133 280 ntBASIC1.31□□□□□ -2.2
RFC3P40938 HIGD1AP15-201ENST00000416198 280 ntBASIC1.31□□□□□ -2.2
RFC3P40938 MTND3P17-201ENST00000416968 344 ntBASIC1.31□□□□□ -2.2
RFC3P40938 AC078809.1-201ENST00000427601 140 ntBASIC1.31□□□□□ -2.2
RFC3P40938 AC010975.2-201ENST00000427781 588 ntBASIC1.31□□□□□ -2.2
RFC3P40938 AL596276.1-201ENST00000434465 418 ntBASIC1.31□□□□□ -2.2
RFC3P40938 AC244670.1-201ENST00000436879 112 ntBASIC1.31□□□□□ -2.2
RFC3P40938 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
RFC3P40938 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.31□□□□□ -2.2
RFC3P40938 GAPDHP17-201ENST00000449858 1001 ntBASIC1.31□□□□□ -2.2
RFC3P40938 AL162395.1-201ENST00000457882 422 ntBASIC1.31□□□□□ -2.2
RFC3P40938 AC087477.1-201ENST00000465747 340 ntBASIC1.31□□□□□ -2.2
RFC3P40938 MTND1P22-201ENST00000510572 951 ntBASIC1.31□□□□□ -2.2
RFC3P40938 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.31□□□□□ -2.2
RFC3P40938 AP001372.4-201ENST00000524889 472 ntBASIC1.31□□□□□ -2.2
RFC3P40938 AC110760.3-201ENST00000598794 467 ntBASIC1.31□□□□□ -2.2
RFC3P40938 AC024933.1-201ENST00000608472 348 ntBASIC1.31□□□□□ -2.2
RFC3P40938 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.31□□□□□ -2.2
RFC3P40938 AP000648.3-201ENST00000623539 4507 ntBASIC1.31□□□□□ -2.2
RFC3P40938 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RFC3P40938 AL161722.3-201ENST00000605789 2983 ntBASIC1.3□□□□□ -2.2
RFC3P40938 MTND5P9-201ENST00000503854 1755 ntBASIC1.3□□□□□ -2.2
RFC3P40938 RNU6-112P-201ENST00000363599 104 ntBASIC1.3□□□□□ -2.2
RFC3P40938 Y_RNA.327-201ENST00000365201 102 ntBASIC1.3□□□□□ -2.2
RFC3P40938 Y_RNA.560-201ENST00000384689 102 ntBASIC1.3□□□□□ -2.2
RFC3P40938 RPS29P13-201ENST00000402041 169 ntBASIC1.3□□□□□ -2.2
RFC3P40938 RN7SKP61-201ENST00000410642 295 ntBASIC1.3□□□□□ -2.2
RFC3P40938 RNU4-46P-201ENST00000410818 138 ntBASIC1.3□□□□□ -2.2
RFC3P40938 RNA5SP247-201ENST00000411181 105 ntBASIC1.3□□□□□ -2.2
RFC3P40938 AC010099.3-201ENST00000423896 409 ntBASIC1.3□□□□□ -2.2
RFC3P40938 SDAD1P3-201ENST00000427380 333 ntBASIC1.3□□□□□ -2.2
RFC3P40938 ISCA1P6-201ENST00000427740 390 ntBASIC1.3□□□□□ -2.2
RFC3P40938 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RFC3P40938 AC005908.1-201ENST00000468701 347 ntBASIC1.3□□□□□ -2.2
RFC3P40938 AC098862.1-201ENST00000504991 413 ntBASIC1.3□□□□□ -2.2
RFC3P40938 MTCO3P7-201ENST00000510008 774 ntBASIC1.3□□□□□ -2.2
RFC3P40938 LRRC34P2-201ENST00000514850 553 ntBASIC1.3□□□□□ -2.2
RFC3P40938 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.3□□□□□ -2.2
RFC3P40938 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.3□□□□□ -2.2
RFC3P40938 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.3□□□□□ -2.2
RFC3P40938 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.3□□□□□ -2.2
RFC3P40938 AL356157.2-201ENST00000605122 111 ntBASIC1.3□□□□□ -2.2
RFC3P40938 AC008250.2-201ENST00000615261 205 ntBASIC1.3□□□□□ -2.2
RFC3P40938 uc_338.11-201ENST00000619132 160 ntBASIC1.3□□□□□ -2.2
RFC3P40938 AC079248.2-201ENST00000623779 326 ntBASIC1.3□□□□□ -2.2
RFC3P40938 AC120349.3-201ENST00000624377 529 ntBASIC1.3□□□□□ -2.2
RFC3P40938 SEPT14P19-203ENST00000633205 211 ntBASIC1.3□□□□□ -2.2
RFC3P40938 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RFC3P40938 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.3□□□□□ -2.2
RFC3P40938 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
RFC3P40938 MIR340-201ENST00000362125 95 ntBASIC1.29□□□□□ -2.2
RFC3P40938 RNU1-62P-201ENST00000362599 164 ntBASIC1.29□□□□□ -2.2
RFC3P40938 RNU6-428P-201ENST00000362942 107 ntBASIC1.29□□□□□ -2.2
RFC3P40938 RNU4-56P-201ENST00000364700 142 ntBASIC1.29□□□□□ -2.2
RFC3P40938 SNORD32A-201ENST00000364805 84 ntBASIC1.29□□□□□ -2.2
RFC3P40938 RNU5A-2P-201ENST00000384337 116 ntBASIC1.29□□□□□ -2.2
RFC3P40938 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
RFC3P40938 RNU1-78P-201ENST00000391248 165 ntBASIC1.29□□□□□ -2.2
RFC3P40938 RNU6-195P-201ENST00000411352 109 ntBASIC1.29□□□□□ -2.2
RFC3P40938 HMGN1P14-201ENST00000412459 517 ntBASIC1.29□□□□□ -2.2
RFC3P40938 MTCO3P41-201ENST00000414801 328 ntBASIC1.29□□□□□ -2.2
RFC3P40938 AL590135.1-201ENST00000422215 156 ntBASIC1.29□□□□□ -2.2
RFC3P40938 AC019205.3-201ENST00000424573 156 ntBASIC1.29□□□□□ -2.2
RFC3P40938 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.29□□□□□ -2.2
RFC3P40938 AC092473.1-201ENST00000441098 221 ntBASIC1.29□□□□□ -2.2
RFC3P40938 AC016700.2-201ENST00000446011 156 ntBASIC1.29□□□□□ -2.2
RFC3P40938 SNRPGP7-201ENST00000469016 106 ntBASIC1.29□□□□□ -2.2
RFC3P40938 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.29□□□□□ -2.2
RFC3P40938 AC015911.1-201ENST00000495111 156 ntBASIC1.29□□□□□ -2.2
RFC3P40938 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.29□□□□□ -2.2
RFC3P40938 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.29□□□□□ -2.2
RFC3P40938 SNORA31.16-201ENST00000516773 139 ntBASIC1.29□□□□□ -2.2
RFC3P40938 RNA5SP503-201ENST00000517047 117 ntBASIC1.29□□□□□ -2.2
RFC3P40938 MIR4422-201ENST00000581938 83 ntBASIC1.29□□□□□ -2.2
RFC3P40938 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.29□□□□□ -2.2
RFC3P40938 AC008945.2-201ENST00000606056 604 ntBASIC1.29□□□□□ -2.2
RFC3P40938 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
RFC3P40938 AC022418.1-201ENST00000624118 445 ntBASIC1.29□□□□□ -2.2
RFC3P40938 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
RFC3P40938 AC245060.5-201ENST00000610778 3293 ntBASIC1.28□□□□□ -2.2
RFC3P40938 MIR337-201ENST00000362281 93 ntBASIC1.28□□□□□ -2.2
RFC3P40938 RNU6-553P-201ENST00000364047 96 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms