Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.19□□□□□ -2.38
CKS2P33552 HMGN1P30-201ENST00000589286 268 ntBASIC0.19□□□□□ -2.38
CKS2P33552 AC012507.3-201ENST00000603556 477 ntBASIC0.19□□□□□ -2.38
CKS2P33552 AL513534.2-201ENST00000603836 250 ntBASIC0.19□□□□□ -2.38
CKS2P33552 AL359821.1-201ENST00000605519 182 ntBASIC0.19□□□□□ -2.38
CKS2P33552 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
CKS2P33552 MIR6516-201ENST00000630554 81 ntBASIC0.19□□□□□ -2.38
CKS2P33552 AC068700.1-201ENST00000565862 3754 ntBASIC0.18□□□□□ -2.38
CKS2P33552 RNU6-78P-201ENST00000362897 107 ntBASIC0.18□□□□□ -2.38
CKS2P33552 RNU6-946P-201ENST00000383878 107 ntBASIC0.18□□□□□ -2.38
CKS2P33552 RNU6-142P-201ENST00000384019 107 ntBASIC0.18□□□□□ -2.38
CKS2P33552 RNU6-505P-201ENST00000384427 107 ntBASIC0.18□□□□□ -2.38
CKS2P33552 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
CKS2P33552 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.18□□□□□ -2.38
CKS2P33552 VPS26BP1-201ENST00000417155 755 ntBASIC0.18□□□□□ -2.38
CKS2P33552 AC060773.1-201ENST00000421698 310 ntBASIC0.18□□□□□ -2.38
CKS2P33552 AC073614.1-201ENST00000438690 650 ntBASIC0.18□□□□□ -2.38
CKS2P33552 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.18□□□□□ -2.38
CKS2P33552 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
CKS2P33552 AL162395.1-201ENST00000457882 422 ntBASIC0.18□□□□□ -2.38
CKS2P33552 RNU7-21P-201ENST00000459430 62 ntBASIC0.18□□□□□ -2.38
CKS2P33552 AC104982.1-201ENST00000478775 574 ntBASIC0.18□□□□□ -2.38
CKS2P33552 HMGN1P12-201ENST00000499125 195 ntBASIC0.18□□□□□ -2.38
CKS2P33552 AC104806.1-201ENST00000508720 308 ntBASIC0.18□□□□□ -2.38
CKS2P33552 AC010587.2-201ENST00000511727 448 ntBASIC0.18□□□□□ -2.38
CKS2P33552 Y_RNA.689-201ENST00000516589 107 ntBASIC0.18□□□□□ -2.38
CKS2P33552 RNU6-1098P-201ENST00000516772 96 ntBASIC0.18□□□□□ -2.38
CKS2P33552 AP001893.2-201ENST00000526949 202 ntBASIC0.18□□□□□ -2.38
CKS2P33552 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.18□□□□□ -2.38
CKS2P33552 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.18□□□□□ -2.38
CKS2P33552 AC109446.1-201ENST00000566172 220 ntBASIC0.18□□□□□ -2.38
CKS2P33552 MIR4714-201ENST00000580728 77 ntBASIC0.18□□□□□ -2.38
CKS2P33552 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.18□□□□□ -2.38
CKS2P33552 AL929325.1-201ENST00000603096 117 ntBASIC0.18□□□□□ -2.38
CKS2P33552 AP002802.2-201ENST00000605877 235 ntBASIC0.18□□□□□ -2.38
CKS2P33552 GHRLOS.1-201ENST00000610995 70 ntBASIC0.18□□□□□ -2.38
CKS2P33552 SNORD98-201ENST00000636377 67 ntBASIC0.18□□□□□ -2.38
CKS2P33552 SNORA33-201ENST00000363664 130 ntBASIC0.17□□□□□ -2.38
CKS2P33552 RNU6-609P-201ENST00000365459 107 ntBASIC0.17□□□□□ -2.38
CKS2P33552 RNU6-348P-201ENST00000384386 107 ntBASIC0.17□□□□□ -2.38
CKS2P33552 MIR320C1-201ENST00000408566 88 ntBASIC0.17□□□□□ -2.38
CKS2P33552 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.17□□□□□ -2.38
CKS2P33552 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.17□□□□□ -2.38
CKS2P33552 AL353718.1-201ENST00000451028 517 ntBASIC0.17□□□□□ -2.38
CKS2P33552 AC233266.1-201ENST00000454518 96 ntBASIC0.17□□□□□ -2.38
CKS2P33552 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.17□□□□□ -2.38
CKS2P33552 AC011406.1-201ENST00000512440 370 ntBASIC0.17□□□□□ -2.38
CKS2P33552 SNORA68.3-201ENST00000515906 83 ntBASIC0.17□□□□□ -2.38
CKS2P33552 AC080078.2-201ENST00000603766 501 ntBASIC0.17□□□□□ -2.38
CKS2P33552 AC242852.1-201ENST00000612151 96 ntBASIC0.17□□□□□ -2.38
CKS2P33552 AC116165.2-201ENST00000616705 206 ntBASIC0.17□□□□□ -2.38
CKS2P33552 AC244015.1-201ENST00000622301 99 ntBASIC0.17□□□□□ -2.38
CKS2P33552 MIR338-201ENST00000636369 67 ntBASIC0.17□□□□□ -2.38
CKS2P33552 RNU6-511P-201ENST00000363496 107 ntBASIC0.16□□□□□ -2.38
CKS2P33552 RNU5E-6P-201ENST00000365574 115 ntBASIC0.16□□□□□ -2.38
CKS2P33552 RPL21P1-201ENST00000399532 476 ntBASIC0.16□□□□□ -2.38
CKS2P33552 RNA5SP201-201ENST00000410316 124 ntBASIC0.16□□□□□ -2.38
CKS2P33552 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.16□□□□□ -2.38
CKS2P33552 RPEP5-201ENST00000441137 268 ntBASIC0.16□□□□□ -2.38
CKS2P33552 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.16□□□□□ -2.38
CKS2P33552 RNU7-14P-201ENST00000459331 62 ntBASIC0.16□□□□□ -2.38
CKS2P33552 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.16□□□□□ -2.38
CKS2P33552 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.16□□□□□ -2.38
CKS2P33552 TRMT112P2-201ENST00000512910 132 ntBASIC0.16□□□□□ -2.38
CKS2P33552 AC027338.1-201ENST00000514840 825 ntBASIC0.16□□□□□ -2.38
CKS2P33552 RN7SKP12-201ENST00000516275 143 ntBASIC0.16□□□□□ -2.38
CKS2P33552 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.16□□□□□ -2.38
CKS2P33552 MIR5093-201ENST00000583199 100 ntBASIC0.16□□□□□ -2.38
CKS2P33552 AC012557.2-201ENST00000605919 418 ntBASIC0.16□□□□□ -2.38
CKS2P33552 AC092106.3-201ENST00000611308 722 ntBASIC0.16□□□□□ -2.38
CKS2P33552 U6.42-201ENST00000618440 107 ntBASIC0.16□□□□□ -2.38
CKS2P33552 AC009509.4-201ENST00000619202 509 ntBASIC0.16□□□□□ -2.38
CKS2P33552 MIR96-201ENST00000362288 78 ntBASIC0.15□□□□□ -2.39
CKS2P33552 SNORA72.2-201ENST00000365028 127 ntBASIC0.15□□□□□ -2.39
CKS2P33552 RNU6-950P-201ENST00000384651 107 ntBASIC0.15□□□□□ -2.39
CKS2P33552 SNORD41-201ENST00000386967 70 ntBASIC0.15□□□□□ -2.39
CKS2P33552 SNORD99-201ENST00000408612 74 ntBASIC0.15□□□□□ -2.39
CKS2P33552 FABP5P4-201ENST00000437203 171 ntBASIC0.15□□□□□ -2.39
CKS2P33552 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.15□□□□□ -2.39
CKS2P33552 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.15□□□□□ -2.39
CKS2P33552 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.15□□□□□ -2.39
CKS2P33552 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.15□□□□□ -2.39
CKS2P33552 RNU6-751P-201ENST00000516382 101 ntBASIC0.15□□□□□ -2.39
CKS2P33552 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.15□□□□□ -2.39
CKS2P33552 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.15□□□□□ -2.39
CKS2P33552 ZNF321P-202ENST00000550843 495 ntBASIC0.15□□□□□ -2.39
CKS2P33552 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.15□□□□□ -2.39
CKS2P33552 MIR4781-201ENST00000585250 76 ntBASIC0.15□□□□□ -2.39
CKS2P33552 AC092574.1-201ENST00000609771 420 ntBASIC0.15□□□□□ -2.39
CKS2P33552 AC068787.1-201ENST00000623908 691 ntBASIC0.15□□□□□ -2.39
CKS2P33552 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
CKS2P33552 RNU5B-4P-201ENST00000363508 111 ntBASIC0.14□□□□□ -2.39
CKS2P33552 RNU6-877P-201ENST00000383868 107 ntBASIC0.14□□□□□ -2.39
CKS2P33552 RNU6-1031P-201ENST00000384773 107 ntBASIC0.14□□□□□ -2.39
CKS2P33552 RNU4-22P-201ENST00000411058 166 ntBASIC0.14□□□□□ -2.39
CKS2P33552 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.14□□□□□ -2.39
CKS2P33552 ELOCP17-201ENST00000414751 326 ntBASIC0.14□□□□□ -2.39
CKS2P33552 C1DP2-201ENST00000418167 426 ntBASIC0.14□□□□□ -2.39
CKS2P33552 UBE2D3P3-201ENST00000426992 425 ntBASIC0.14□□□□□ -2.39
CKS2P33552 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms