Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 RPL39P29-201ENST00000447779 157 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 AC245102.2-201ENST00000448956 180 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 SEPT14P2-201ENST00000453405 183 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 RPL23AP42-201ENST00000471152 471 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.01□□□□□ -2.09
PTPN4P29074 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.01□□□□□ -2.09
PTPN4P29074 AC022447.4-201ENST00000504053 364 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PTPN4P29074 SEPT14P4-201ENST00000513445 186 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 RNU6-1038P-201ENST00000516516 104 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.01□□□□□ -2.09
PTPN4P29074 FO082796.1-201ENST00000523795 183 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 CENPUP1-201ENST00000526649 1202 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.01□□□□□ -2.09
PTPN4P29074 NDUFA5P6-201ENST00000542110 379 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.01□□□□□ -2.09
PTPN4P29074 AL157687.1-201ENST00000554853 619 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 AL162413.1-201ENST00000603198 110 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 AC025754.2-201ENST00000606491 432 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 AC005296.1-201ENST00000616145 209 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 AL159153.1-201ENST00000619688 317 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 YWHAEP7-203ENST00000622054 312 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 AC090517.3-201ENST00000625170 141 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PTPN4P29074 KPNA2P1-201ENST00000458289 1591 ntBASIC2.01□□□□□ -2.09
PTPN4P29074 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.01□□□□□ -2.09
PTPN4P29074 AP000560.1-201ENST00000624150 1937 ntBASIC2□□□□□ -2.09
PTPN4P29074 RNU6-105P-201ENST00000363909 104 ntBASIC2□□□□□ -2.09
PTPN4P29074 RNU6-82P-201ENST00000363970 107 ntBASIC2□□□□□ -2.09
PTPN4P29074 U3.13-201ENST00000364804 214 ntBASIC2□□□□□ -2.09
PTPN4P29074 RNU4-66P-201ENST00000365199 138 ntBASIC2□□□□□ -2.09
PTPN4P29074 MIR514A2-201ENST00000385131 88 ntBASIC2□□□□□ -2.09
PTPN4P29074 MIR514A3-201ENST00000385132 88 ntBASIC2□□□□□ -2.09
PTPN4P29074 RNU6-1068P-201ENST00000410958 103 ntBASIC2□□□□□ -2.09
PTPN4P29074 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2□□□□□ -2.09
PTPN4P29074 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2□□□□□ -2.09
PTPN4P29074 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2□□□□□ -2.09
PTPN4P29074 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2□□□□□ -2.09
PTPN4P29074 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2□□□□□ -2.09
PTPN4P29074 MTND3P16-201ENST00000452205 344 ntBASIC2□□□□□ -2.09
PTPN4P29074 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2□□□□□ -2.09
PTPN4P29074 AL137159.1-201ENST00000452808 512 ntBASIC2□□□□□ -2.09
PTPN4P29074 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2□□□□□ -2.09
PTPN4P29074 Y_RNA.638-201ENST00000459374 113 ntBASIC2□□□□□ -2.09
PTPN4P29074 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2□□□□□ -2.09
PTPN4P29074 RPL38P4-201ENST00000502376 214 ntBASIC2□□□□□ -2.09
PTPN4P29074 HMGB1P35-201ENST00000503360 598 ntBASIC2□□□□□ -2.09
PTPN4P29074 MRPS17P9-201ENST00000511924 393 ntBASIC2□□□□□ -2.09
PTPN4P29074 AC018630.3-201ENST00000542637 96 ntBASIC2□□□□□ -2.09
PTPN4P29074 VN1R80P-201ENST00000597126 338 ntBASIC2□□□□□ -2.09
PTPN4P29074 ELOCP5-201ENST00000604924 333 ntBASIC2□□□□□ -2.09
PTPN4P29074 MIR1321-201ENST00000637766 79 ntBASIC2□□□□□ -2.09
PTPN4P29074 AC068137.3-201ENST00000639191 341 ntBASIC2□□□□□ -2.09
PTPN4P29074 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
PTPN4P29074 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
PTPN4P29074 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2□□□□□ -2.09
PTPN4P29074 ZNF702P-202ENST00000434269 1966 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 RNU6-1090P-201ENST00000364065 94 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 Y_RNA.378-201ENST00000365652 113 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PTPN4P29074 Y_RNA.554-201ENST00000384672 102 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 RNU6-482P-201ENST00000391068 107 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 POLHP1-201ENST00000411806 470 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.99□□□□□ -2.09
PTPN4P29074 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.99□□□□□ -2.09
PTPN4P29074 CBX3P6-201ENST00000430257 527 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 AL445646.1-201ENST00000431784 216 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.99□□□□□ -2.09
PTPN4P29074 MTND1P34-201ENST00000438556 671 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 AL353689.1-201ENST00000438895 199 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.99□□□□□ -2.09
PTPN4P29074 AC013470.1-201ENST00000453438 462 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 AC091885.1-201ENST00000506658 268 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.99□□□□□ -2.09
PTPN4P29074 AC116337.1-201ENST00000509680 687 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 SNORA14.1-201ENST00000516113 141 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 RNU6-189P-201ENST00000516120 101 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 CYCSP27-201ENST00000527643 293 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 ZNF519P2-201ENST00000557032 169 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.99□□□□□ -2.09
PTPN4P29074 AL109918.3-201ENST00000603072 338 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 AC009318.2-201ENST00000610917 651 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 AC103705.1-201ENST00000619013 241 ntBASIC1.99□□□□□ -2.09
PTPN4P29074 FER-210ENST00000628534 558 ntTSL 5 BASIC1.99□□□□□ -2.09
PTPN4P29074 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PTPN4P29074 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PTPN4P29074 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PTPN4P29074 RNU4-56P-201ENST00000364700 142 ntBASIC1.98□□□□□ -2.09
PTPN4P29074 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PTPN4P29074 RNU6-546P-201ENST00000383991 107 ntBASIC1.98□□□□□ -2.09
PTPN4P29074 RNU6-611P-201ENST00000384276 104 ntBASIC1.98□□□□□ -2.09
PTPN4P29074 MIR29C-201ENST00000385231 88 ntBASIC1.98□□□□□ -2.09
PTPN4P29074 AL356432.1-201ENST00000405809 419 ntBASIC1.98□□□□□ -2.09
PTPN4P29074 AL030996.1-201ENST00000411430 235 ntBASIC1.98□□□□□ -2.09
PTPN4P29074 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.98□□□□□ -2.09
PTPN4P29074 HMGN2P19-201ENST00000425149 265 ntBASIC1.98□□□□□ -2.09
PTPN4P29074 RPL23AP6-201ENST00000446637 472 ntBASIC1.98□□□□□ -2.09
PTPN4P29074 Y_RNA.654-201ENST00000497848 106 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms