Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SNORD115-46-201ENST00000390982 71 ntBASIC3.17□□□□□ -1.9
CD40P25942 MIR320B2-201ENST00000408479 138 ntBASIC3.17□□□□□ -1.9
CD40P25942 Y_RNA.595-201ENST00000410403 105 ntBASIC3.17□□□□□ -1.9
CD40P25942 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.17□□□□□ -1.9
CD40P25942 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.17□□□□□ -1.9
CD40P25942 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.17□□□□□ -1.9
CD40P25942 AC073901.1-201ENST00000462471 408 ntBASIC3.17□□□□□ -1.9
CD40P25942 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.17□□□□□ -1.9
CD40P25942 SNORA40.9-201ENST00000515895 93 ntBASIC3.17□□□□□ -1.9
CD40P25942 Y_RNA.683-201ENST00000516508 93 ntBASIC3.17□□□□□ -1.9
CD40P25942 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.17□□□□□ -1.9
CD40P25942 AC023157.2-201ENST00000540596 141 ntBASIC3.17□□□□□ -1.9
CD40P25942 AC008011.1-201ENST00000545989 227 ntBASIC3.17□□□□□ -1.9
CD40P25942 EIF4A1P12-201ENST00000551910 141 ntBASIC3.17□□□□□ -1.9
CD40P25942 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.17□□□□□ -1.9
CD40P25942 AL360157.1-201ENST00000565962 87 ntBASIC3.17□□□□□ -1.9
CD40P25942 AL356575.1-201ENST00000603008 283 ntBASIC3.17□□□□□ -1.9
CD40P25942 MZT1P2-201ENST00000604387 248 ntBASIC3.17□□□□□ -1.9
CD40P25942 SNRPGP20-201ENST00000604477 205 ntBASIC3.17□□□□□ -1.9
CD40P25942 U3.45-201ENST00000607547 219 ntBASIC3.17□□□□□ -1.9
CD40P25942 AC019176.2-201ENST00000611579 315 ntBASIC3.17□□□□□ -1.9
CD40P25942 AL357075.2-201ENST00000614906 189 ntBASIC3.17□□□□□ -1.9
CD40P25942 AC018692.3-201ENST00000623929 123 ntBASIC3.17□□□□□ -1.9
CD40P25942 AC069528.2-201ENST00000624849 1991 ntBASIC3.17□□□□□ -1.9
CD40P25942 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CD40P25942 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CD40P25942 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.17□□□□□ -1.9
CD40P25942 AC026241.1-201ENST00000517873 2142 ntBASIC3.17□□□□□ -1.9
CD40P25942 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.17□□□□□ -1.9
CD40P25942 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CD40P25942 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CD40P25942 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CD40P25942 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CD40P25942 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CD40P25942 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CD40P25942 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.16□□□□□ -1.9
CD40P25942 AC010615.1-201ENST00000594254 1764 ntBASIC3.16□□□□□ -1.9
CD40P25942 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.16□□□□□ -1.9
CD40P25942 MFSD8-236ENST00000641509 4050 ntBASIC3.16□□□□□ -1.9
CD40P25942 Y_RNA.179-201ENST00000363844 90 ntBASIC3.16□□□□□ -1.9
CD40P25942 MIR218-2-201ENST00000385006 110 ntBASIC3.16□□□□□ -1.9
CD40P25942 MT-TG-201ENST00000387429 68 ntBASIC3.16□□□□□ -1.9
CD40P25942 SNORA12-201ENST00000391162 147 ntBASIC3.16□□□□□ -1.9
CD40P25942 AL512633.1-201ENST00000399931 655 ntBASIC3.16□□□□□ -1.9
CD40P25942 RNU2-38P-201ENST00000410856 79 ntBASIC3.16□□□□□ -1.9
CD40P25942 RPL27AP5-201ENST00000469428 449 ntBASIC3.16□□□□□ -1.9
CD40P25942 RPL26P26-201ENST00000480251 434 ntBASIC3.16□□□□□ -1.9
CD40P25942 AC140059.1-201ENST00000489238 361 ntBASIC3.16□□□□□ -1.9
CD40P25942 AC110768.1-201ENST00000509222 400 ntBASIC3.16□□□□□ -1.9
CD40P25942 RN7SKP209-201ENST00000516888 304 ntBASIC3.16□□□□□ -1.9
CD40P25942 HSPE1P18-201ENST00000517602 280 ntBASIC3.16□□□□□ -1.9
CD40P25942 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.16□□□□□ -1.9
CD40P25942 MIR3944-201ENST00000581277 108 ntBASIC3.16□□□□□ -1.9
CD40P25942 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.16□□□□□ -1.9
CD40P25942 AC090517.3-201ENST00000625170 141 ntBASIC3.16□□□□□ -1.9
CD40P25942 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.16□□□□□ -1.9
CD40P25942 MIR7515-201ENST00000637837 67 ntBASIC3.16□□□□□ -1.9
CD40P25942 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CD40P25942 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CD40P25942 MTND5P35-201ENST00000557537 1720 ntBASIC3.16□□□□□ -1.9
CD40P25942 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
CD40P25942 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.15□□□□□ -1.9
CD40P25942 SNORD9-201ENST00000362566 104 ntBASIC3.15□□□□□ -1.91
CD40P25942 Y_RNA.84-201ENST00000363011 104 ntBASIC3.15□□□□□ -1.91
CD40P25942 snoU2_19.2-201ENST00000363024 80 ntBASIC3.15□□□□□ -1.91
CD40P25942 RNU6-727P-201ENST00000363592 107 ntBASIC3.15□□□□□ -1.91
CD40P25942 RNU6-793P-201ENST00000384233 104 ntBASIC3.15□□□□□ -1.91
CD40P25942 Y_RNA.602-201ENST00000410535 92 ntBASIC3.15□□□□□ -1.91
CD40P25942 RNU6-1328P-201ENST00000410938 106 ntBASIC3.15□□□□□ -1.91
CD40P25942 RNU2-25P-201ENST00000411041 191 ntBASIC3.15□□□□□ -1.91
CD40P25942 AC027124.2-201ENST00000428249 105 ntBASIC3.15□□□□□ -1.91
CD40P25942 ARL5AP4-201ENST00000430731 512 ntBASIC3.15□□□□□ -1.91
CD40P25942 AC005002.2-201ENST00000438228 269 ntBASIC3.15□□□□□ -1.91
CD40P25942 SNORD127-201ENST00000458892 86 ntBASIC3.15□□□□□ -1.91
CD40P25942 RNU6-1132P-201ENST00000459214 107 ntBASIC3.15□□□□□ -1.91
CD40P25942 AC091153.1-201ENST00000466297 402 ntBASIC3.15□□□□□ -1.91
CD40P25942 AC091179.3-201ENST00000474761 144 ntBASIC3.15□□□□□ -1.91
CD40P25942 RRN3P3-201ENST00000549207 578 ntBASIC3.15□□□□□ -1.91
CD40P25942 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.15□□□□□ -1.91
CD40P25942 AC073657.2-201ENST00000605661 303 ntBASIC3.15□□□□□ -1.91
CD40P25942 AC090425.1-201ENST00000610007 140 ntBASIC3.15□□□□□ -1.91
CD40P25942 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CD40P25942 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.15□□□□□ -1.91
CD40P25942 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CD40P25942 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.15□□□□□ -1.91
CD40P25942 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CD40P25942 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CD40P25942 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.14□□□□□ -1.91
CD40P25942 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CD40P25942 SNORD113-8-201ENST00000363497 74 ntBASIC3.14□□□□□ -1.91
CD40P25942 RNU6-961P-201ENST00000363893 105 ntBASIC3.14□□□□□ -1.91
CD40P25942 Y_RNA.476-201ENST00000384347 108 ntBASIC3.14□□□□□ -1.91
CD40P25942 AC093578.1-201ENST00000415219 368 ntBASIC3.14□□□□□ -1.91
CD40P25942 AC096920.1-201ENST00000423991 241 ntBASIC3.14□□□□□ -1.91
CD40P25942 CYCSP4-201ENST00000429682 331 ntBASIC3.14□□□□□ -1.91
CD40P25942 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.14□□□□□ -1.91
CD40P25942 AC027176.1-201ENST00000560204 514 ntBASIC3.14□□□□□ -1.91
CD40P25942 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.14□□□□□ -1.91
CD40P25942 AC026470.2-201ENST00000561492 181 ntBASIC3.14□□□□□ -1.91
CD40P25942 MIR3922-201ENST00000585192 84 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms