Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DPA1P20036 RNU6-956P-201ENST00000458868 103 ntBASIC1.9□□□□□ -2.11
HLA-DPA1P20036 AC016632.1-201ENST00000503994 196 ntBASIC1.9□□□□□ -2.11
HLA-DPA1P20036 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.9□□□□□ -2.11
HLA-DPA1P20036 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DPA1P20036 OSBPL9P5-201ENST00000542581 171 ntBASIC1.9□□□□□ -2.11
HLA-DPA1P20036 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DPA1P20036 AC104984.5-201ENST00000586878 94 ntBASIC1.9□□□□□ -2.11
HLA-DPA1P20036 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DPA1P20036 AC009318.2-201ENST00000610917 651 ntBASIC1.9□□□□□ -2.11
HLA-DPA1P20036 AC008147.4-201ENST00000617570 1204 ntBASIC1.9□□□□□ -2.11
HLA-DPA1P20036 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
HLA-DPA1P20036 RNU6-996P-201ENST00000365438 107 ntBASIC1.89□□□□□ -2.11
HLA-DPA1P20036 RNU5A-6P-201ENST00000384136 116 ntBASIC1.89□□□□□ -2.11
HLA-DPA1P20036 MIR504-201ENST00000385065 83 ntBASIC1.89□□□□□ -2.11
HLA-DPA1P20036 AC068050.1-201ENST00000394891 380 ntBASIC1.89□□□□□ -2.11
HLA-DPA1P20036 RNU2-20P-201ENST00000410425 191 ntBASIC1.89□□□□□ -2.11
HLA-DPA1P20036 VN1R36P-201ENST00000414936 291 ntBASIC1.89□□□□□ -2.11
HLA-DPA1P20036 RPL23AP95-201ENST00000426806 265 ntBASIC1.89□□□□□ -2.11
HLA-DPA1P20036 AC073464.1-201ENST00000429823 534 ntBASIC1.89□□□□□ -2.11
HLA-DPA1P20036 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DPA1P20036 RNU2-44P-201ENST00000516795 194 ntBASIC1.89□□□□□ -2.11
HLA-DPA1P20036 AC087441.2-201ENST00000529141 262 ntBASIC1.89□□□□□ -2.11
HLA-DPA1P20036 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HLA-DPA1P20036 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DPA1P20036 AC078795.3-201ENST00000602913 472 ntBASIC1.89□□□□□ -2.11
HLA-DPA1P20036 AC073648.5-201ENST00000603502 305 ntBASIC1.89□□□□□ -2.11
HLA-DPA1P20036 Z99497.2-201ENST00000603634 310 ntBASIC1.89□□□□□ -2.11
HLA-DPA1P20036 RMST_6.1-201ENST00000611980 203 ntBASIC1.89□□□□□ -2.11
HLA-DPA1P20036 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DPA1P20036 LINC02555-201ENST00000563933 1951 ntBASIC1.89□□□□□ -2.11
HLA-DPA1P20036 U3.9-201ENST00000363823 204 ntBASIC1.88□□□□□ -2.11
HLA-DPA1P20036 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DPA1P20036 Y_RNA.504-201ENST00000384481 104 ntBASIC1.88□□□□□ -2.11
HLA-DPA1P20036 SNORA26.3-201ENST00000391119 136 ntBASIC1.88□□□□□ -2.11
HLA-DPA1P20036 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
HLA-DPA1P20036 RNA5SP201-201ENST00000410316 124 ntBASIC1.88□□□□□ -2.11
HLA-DPA1P20036 MTCO3P41-201ENST00000414801 328 ntBASIC1.88□□□□□ -2.11
HLA-DPA1P20036 AL445685.2-201ENST00000422551 342 ntBASIC1.88□□□□□ -2.11
HLA-DPA1P20036 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DPA1P20036 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DPA1P20036 RNU7-180P-201ENST00000459240 63 ntBASIC1.88□□□□□ -2.11
HLA-DPA1P20036 AC107393.1-201ENST00000512403 346 ntBASIC1.88□□□□□ -2.11
HLA-DPA1P20036 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.88□□□□□ -2.11
HLA-DPA1P20036 RNA5SP182-201ENST00000516064 82 ntBASIC1.88□□□□□ -2.11
HLA-DPA1P20036 MTND4P7-201ENST00000523876 130 ntBASIC1.88□□□□□ -2.11
HLA-DPA1P20036 ANP32BP3-201ENST00000559213 706 ntBASIC1.88□□□□□ -2.11
HLA-DPA1P20036 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DPA1P20036 AC004223.2-201ENST00000590309 544 ntBASIC1.88□□□□□ -2.11
HLA-DPA1P20036 AP001836.1-201ENST00000604675 523 ntBASIC1.88□□□□□ -2.11
HLA-DPA1P20036 RNU6-438P-201ENST00000365561 103 ntBASIC1.87□□□□□ -2.11
HLA-DPA1P20036 SNORA75-201ENST00000384158 137 ntBASIC1.87□□□□□ -2.11
HLA-DPA1P20036 SNORD116-8-201ENST00000384365 95 ntBASIC1.87□□□□□ -2.11
HLA-DPA1P20036 MIR583-201ENST00000384846 75 ntBASIC1.87□□□□□ -2.11
HLA-DPA1P20036 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.87□□□□□ -2.11
HLA-DPA1P20036 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DPA1P20036 AC123900.1-201ENST00000420390 96 ntBASIC1.87□□□□□ -2.11
HLA-DPA1P20036 RPL31P63-201ENST00000422565 375 ntBASIC1.87□□□□□ -2.11
HLA-DPA1P20036 VN1R108P-201ENST00000431580 830 ntBASIC1.87□□□□□ -2.11
HLA-DPA1P20036 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DPA1P20036 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DPA1P20036 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DPA1P20036 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DPA1P20036 AC098862.1-201ENST00000504991 413 ntBASIC1.87□□□□□ -2.11
HLA-DPA1P20036 AC091874.1-201ENST00000511402 339 ntBASIC1.87□□□□□ -2.11
HLA-DPA1P20036 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.87□□□□□ -2.11
HLA-DPA1P20036 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DPA1P20036 MTND3P12-201ENST00000559068 328 ntBASIC1.87□□□□□ -2.11
HLA-DPA1P20036 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DPA1P20036 PCGEM1.1-201ENST00000613431 131 ntBASIC1.87□□□□□ -2.11
HLA-DPA1P20036 uc_338.34-201ENST00000617467 174 ntBASIC1.87□□□□□ -2.11
HLA-DPA1P20036 AL354950.2-201ENST00000617939 290 ntBASIC1.87□□□□□ -2.11
HLA-DPA1P20036 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.87□□□□□ -2.11
HLA-DPA1P20036 Z69908.1-201ENST00000622603 247 ntBASIC1.87□□□□□ -2.11
HLA-DPA1P20036 AL354685.2-201ENST00000448218 1447 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 AL356292.1-201ENST00000283110 373 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HLA-DPA1P20036 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
HLA-DPA1P20036 RNU6-1106P-201ENST00000390845 107 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 RNA5SP100-201ENST00000410903 110 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 RNA5SP59-201ENST00000410922 110 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 NCOR1P3-201ENST00000420479 303 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 AC002486.1-201ENST00000435098 391 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DPA1P20036 SNRPEP8-201ENST00000442866 260 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 AC073415.1-201ENST00000449240 153 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.86□□□□□ -2.11
HLA-DPA1P20036 AC130509.1-201ENST00000464158 433 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 AC087884.1-201ENST00000469738 328 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 AL163973.1-201ENST00000484753 577 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.86□□□□□ -2.11
HLA-DPA1P20036 RNU6-567P-201ENST00000516746 107 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.86□□□□□ -2.11
HLA-DPA1P20036 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DPA1P20036 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DPA1P20036 MIR4448-201ENST00000584360 86 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 AC005786.1-201ENST00000588553 154 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 Z98751.3-201ENST00000604447 521 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms