Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 MIR559-201ENST00000385188 96 ntBASIC2.5□□□□□ -2.01
CDH1P12830 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CDH1P12830 MIR548P-201ENST00000408336 84 ntBASIC2.5□□□□□ -2.01
CDH1P12830 RNU2-25P-201ENST00000411041 191 ntBASIC2.5□□□□□ -2.01
CDH1P12830 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.5□□□□□ -2.01
CDH1P12830 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.5□□□□□ -2.01
CDH1P12830 AC063976.3-201ENST00000426849 329 ntBASIC2.5□□□□□ -2.01
CDH1P12830 AL031659.1-201ENST00000447075 539 ntBASIC2.5□□□□□ -2.01
CDH1P12830 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH1P12830 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.5□□□□□ -2.01
CDH1P12830 MIR2053-201ENST00000459295 91 ntBASIC2.5□□□□□ -2.01
CDH1P12830 AP001486.1-201ENST00000463339 476 ntBASIC2.5□□□□□ -2.01
CDH1P12830 RNU6-120P-201ENST00000516077 103 ntBASIC2.5□□□□□ -2.01
CDH1P12830 RNA5SP402-201ENST00000517148 110 ntBASIC2.5□□□□□ -2.01
CDH1P12830 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH1P12830 AC005899.2-201ENST00000584353 90 ntBASIC2.5□□□□□ -2.01
CDH1P12830 RPL23AP78-201ENST00000599928 470 ntBASIC2.5□□□□□ -2.01
CDH1P12830 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.5□□□□□ -2.01
CDH1P12830 AL158827.2-201ENST00000602494 330 ntBASIC2.5□□□□□ -2.01
CDH1P12830 AL391813.1-201ENST00000603098 260 ntBASIC2.5□□□□□ -2.01
CDH1P12830 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH1P12830 uc_338.22-201ENST00000622722 187 ntBASIC2.5□□□□□ -2.01
CDH1P12830 AL691447.3-201ENST00000635020 330 ntBASIC2.5□□□□□ -2.01
CDH1P12830 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CDH1P12830 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
CDH1P12830 MTND5P30-201ENST00000452896 1731 ntBASIC2.5□□□□□ -2.01
CDH1P12830 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CDH1P12830 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CDH1P12830 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.5□□□□□ -2.01
CDH1P12830 RBBP8P1-201ENST00000449447 1844 ntBASIC2.49□□□□□ -2.01
CDH1P12830 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.49□□□□□ -2.01
CDH1P12830 AC008669.1-201ENST00000565823 2178 ntBASIC2.49□□□□□ -2.01
CDH1P12830 AC062016.1-201ENST00000355719 319 ntBASIC2.49□□□□□ -2.01
CDH1P12830 RNU6-487P-201ENST00000365430 104 ntBASIC2.49□□□□□ -2.01
CDH1P12830 RNU6-748P-201ENST00000384648 107 ntBASIC2.49□□□□□ -2.01
CDH1P12830 RNU6-19P-201ENST00000384718 107 ntBASIC2.49□□□□□ -2.01
CDH1P12830 EIF4EP2-201ENST00000422816 654 ntBASIC2.49□□□□□ -2.01
CDH1P12830 AC004383.1-201ENST00000438135 289 ntBASIC2.49□□□□□ -2.01
CDH1P12830 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH1P12830 AL137792.2-201ENST00000443484 235 ntBASIC2.49□□□□□ -2.01
CDH1P12830 AC079354.2-201ENST00000453523 154 ntBASIC2.49□□□□□ -2.01
CDH1P12830 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH1P12830 Y_RNA.631-201ENST00000459607 101 ntBASIC2.49□□□□□ -2.01
CDH1P12830 AC073901.1-201ENST00000462471 408 ntBASIC2.49□□□□□ -2.01
CDH1P12830 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH1P12830 RPS27P26-201ENST00000494583 239 ntBASIC2.49□□□□□ -2.01
CDH1P12830 AC022447.4-201ENST00000504053 364 ntBASIC2.49□□□□□ -2.01
CDH1P12830 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH1P12830 RNU5F-8P-201ENST00000515941 111 ntBASIC2.49□□□□□ -2.01
CDH1P12830 RNU6-470P-201ENST00000515954 104 ntBASIC2.49□□□□□ -2.01
CDH1P12830 RNA5SP282-201ENST00000516355 108 ntBASIC2.49□□□□□ -2.01
CDH1P12830 SNORA31.11-201ENST00000516528 139 ntBASIC2.49□□□□□ -2.01
CDH1P12830 CKS1BP7-201ENST00000522230 235 ntBASIC2.49□□□□□ -2.01
CDH1P12830 CBX3P8-201ENST00000532412 525 ntBASIC2.49□□□□□ -2.01
CDH1P12830 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.49□□□□□ -2.01
CDH1P12830 MIR5696-201ENST00000578474 85 ntBASIC2.49□□□□□ -2.01
CDH1P12830 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH1P12830 MIR4273-201ENST00000582824 84 ntBASIC2.49□□□□□ -2.01
CDH1P12830 MIR5092-201ENST00000583139 88 ntBASIC2.49□□□□□ -2.01
CDH1P12830 AC005014.2-201ENST00000607795 599 ntBASIC2.49□□□□□ -2.01
CDH1P12830 AC009318.2-201ENST00000610917 651 ntBASIC2.49□□□□□ -2.01
CDH1P12830 AC024581.2-201ENST00000619986 252 ntBASIC2.49□□□□□ -2.01
CDH1P12830 AC099654.7-201ENST00000635788 2127 ntBASIC2.49□□□□□ -2.01
CDH1P12830 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDH1P12830 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.49□□□□□ -2.01
CDH1P12830 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CDH1P12830 Y_RNA.5-201ENST00000362334 102 ntBASIC2.48□□□□□ -2.01
CDH1P12830 Y_RNA.31-201ENST00000362574 102 ntBASIC2.48□□□□□ -2.01
CDH1P12830 Y_RNA.48-201ENST00000362710 103 ntBASIC2.48□□□□□ -2.01
CDH1P12830 SNORD32A-201ENST00000364805 84 ntBASIC2.48□□□□□ -2.01
CDH1P12830 Y_RNA.326-201ENST00000365176 113 ntBASIC2.48□□□□□ -2.01
CDH1P12830 Y_RNA.445-201ENST00000384168 102 ntBASIC2.48□□□□□ -2.01
CDH1P12830 Y_RNA.463-201ENST00000384271 102 ntBASIC2.48□□□□□ -2.01
CDH1P12830 RNU6-784P-201ENST00000384330 106 ntBASIC2.48□□□□□ -2.01
CDH1P12830 Y_RNA.533-201ENST00000384596 114 ntBASIC2.48□□□□□ -2.01
CDH1P12830 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CDH1P12830 RNA5SP184-201ENST00000411071 108 ntBASIC2.48□□□□□ -2.01
CDH1P12830 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH1P12830 AC009414.1-201ENST00000427200 443 ntBASIC2.48□□□□□ -2.01
CDH1P12830 RPS12P2-201ENST00000439728 269 ntBASIC2.48□□□□□ -2.01
CDH1P12830 AC124916.1-201ENST00000444020 547 ntBASIC2.48□□□□□ -2.01
CDH1P12830 AC108938.1-201ENST00000451204 136 ntBASIC2.48□□□□□ -2.01
CDH1P12830 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH1P12830 AC022493.2-201ENST00000506122 481 ntBASIC2.48□□□□□ -2.01
CDH1P12830 AC091874.1-201ENST00000511402 339 ntBASIC2.48□□□□□ -2.01
CDH1P12830 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH1P12830 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.48□□□□□ -2.01
CDH1P12830 RNU5B-3P-201ENST00000516601 115 ntBASIC2.48□□□□□ -2.01
CDH1P12830 RPPH1-2P-201ENST00000516688 293 ntBASIC2.48□□□□□ -2.01
CDH1P12830 RNU6-307P-201ENST00000516743 106 ntBASIC2.48□□□□□ -2.01
CDH1P12830 AP003072.1-201ENST00000531740 145 ntBASIC2.48□□□□□ -2.01
CDH1P12830 SNRPGP18-201ENST00000553000 214 ntBASIC2.48□□□□□ -2.01
CDH1P12830 MIR3171-201ENST00000584270 74 ntBASIC2.48□□□□□ -2.01
CDH1P12830 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CDH1P12830 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.48□□□□□ -2.01
CDH1P12830 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH1P12830 AC110079.1-202ENST00000635213 138 ntBASIC2.48□□□□□ -2.01
CDH1P12830 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CDH1P12830 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
CDH1P12830 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms